Setaria italica (foxtail millet): 101760799
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Entry
101760799 CDS
T02818
Name
(RefSeq) RNA-binding protein Y14B
KO
K12876
RNA-binding protein 8A
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
sita03015
mRNA surveillance pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101760799
09122 Translation
03013 Nucleocytoplasmic transport
101760799
03015 mRNA surveillance pathway
101760799
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101760799
03041 Spliceosome [BR:
sita03041
]
101760799
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101760799
Spliceosome [BR:
sita03041
]
Complex C
Other components
EJC/TREX
101760799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Motif
Other DBs
NCBI-GeneID:
101760799
NCBI-ProteinID:
XP_004981327
UniProt:
K4AFB2
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All DBs
Position
IX:complement(2402442..2406730)
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AA seq
202 aa
AA seq
DB search
MVAAMGRAAAADEEEDVEFVDYDQDDEDAMEEDGRAVRALPVPHIVSPAVVRTRGRFAGC
SPSVLAPSRDRFDSLTDEGDNGYGPQRSIEGWTILVCGVKEDAEEEDLHNVFGEFGRVKD
LHLNLERRTGYAKGYALIEYESFEEAQAAIRAMNGTQLLTKTVYVDWAFSRGPIKNAMST
RPPRPRSRTPPRRLNALMLTPY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggcgatggggcgggcggcggcagcggacgaggaggaggacgtggagttcgtc
gactacgaccaggacgacgaggacgccatggaggaggacggccgcgccgtccgcgcgctc
cccgtgccccacatcgtctccccggccgtggtgcgcacccgcgggcgcttcgccggctgc
agcccctccgtcctcgcccccagccgcgaccgcttcgactccctcaccgacgaaggcgac
aacggatacggcccgcagcgctctattgaaggatggacaattcttgtctgtggagttaaa
gaagatgcagaagaagaagatctgcacaacgttttcggtgaatttggtcgtgtcaaggac
ttgcatttgaatctagaacgccgcactggatatgccaagggatatgcgctgattgaatat
gaaagctttgaggaagcacaggctgcgatcagagcaatgaatgggactcagctgttgaca
aagactgtctatgttgattgggcattcagcagaggtcctataaagaacgccatgagcaca
aggccaccacgcccaagatccaggactccaccgcgcaggcttaatgccttgatgctgacg
ccatattga
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integrated database retrieval system