Setaria italica (foxtail millet): 101761356
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Entry
101761356 CDS
T02818
Name
(RefSeq) transcription initiation factor TFIID subunit 4b isoform X3
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101761356
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101761356
03036 Chromosome and associated proteins [BR:
sita03036
]
101761356
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101761356
Coactivators
SAGA/TFTC/STAGA complex
101761356
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
101761356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
RST
SPMIP10-like
DUF7325
SCIMP
Motif
Other DBs
NCBI-GeneID:
101761356
NCBI-ProteinID:
XP_004983942
UniProt:
K4A5I4
LinkDB
All DBs
Position
IX:41619385..41628888
Genome browser
AA seq
913 aa
AA seq
DB search
MDPIMKLLEDDEDESLHSGADVEAFTAALNREVEASASTSSTISAPPAASSSSSQPTDHG
AALLPQENKSLLNHGHGQWQDRVKNETANQESQQQEQTHLLRNDQPSRPEIISQGSDNKD
LTSNTPKECELLKVKQELGNTSQQGIVAQQQPMQQMKSEQTPIVAQQQPMPQMKSEQAPI
VALQQPLQQMKSQQTPHTNQTNGATTAAKAPVVTFHMLLPILRRYIDKDKDMQVQSIFAK
LRKNEVSKEHFLKVVRNIVGDKVLKLALSEYQMQHTAQAQRNTQTNPGNYSLLSQVSGQQ
TVPSGSMTDEQEAYPGAHTIPMKQAIDNLRPPQFRPSLSSQVQSIRGYSPSQSNAHKANE
TGNMSDGKGAHMLQTRPPNTLTPAQTMQHHVQRPQTPSPMFGTNSIHARPFPRPVGSPAA
SFRPQMTDPNQRAQLVQGAVTTVAGSVPTQSIVSGNAPTNQSTWQKSANKEQKTNSFTPT
AHMNKETISQNSESSQNSFVAMHAKQVNQAPGSSKGGGGMENQSPKLSASKSSTTTNSSQ
TQSHVTQAEPKLQVQSSVQAPPAAASKTPQRKASSGQKKPLEALGSSPPPSSKKQKTSGG
FHEQSIDQLNDVTAVSGVNLREEEEQLFSAPKEESRVSEAARRVVQLEEEKLILQKGPLA
RKLAEIMRKCNLKVIGTDVERCLSMCVEERLRGFISDIIRFSKQRVDVEKSRHRFYPLSS
DVRSHIMRVNREAKEQWEKKQAEDAERIRKQNDYMQGDGNANIDLEKDKNETRASSKHAK
EDDDKMRTTAANVAARVAAGGDDMLSKWQLLAERNKQRSEGGDGSSGSVPGNMLQHKPSL
KSGKDSMEDQGIEKRGYSTMLGSGGIRRSPLTKVARSVSVKDVIAALEREPQMSKSSLLF
QLYGRPLTEPAAK
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggatcccatcatgaagctcctcgaggacgacgaggacgagagcctgcactcgggcgcc
gacgtcgaggccttcacggcggcgctcaaccgcgaggtggaggccagtgccagcaccagc
agcaccatcagtgccccgcccgccgcctcctcctcctcgtcccagcctacggatcacggc
gccgcacttctacctcaggaaaacaagtcattgttaaaccatggtcatggacagtggcaa
gatcgagtaaagaatgaaactgcaaaccaggagagtcaacaacaggaacagacacatcta
cttagaaatgatcagccatcaagacctgaaattatttctcaaggttctgataacaaagac
cttacttctaatacaccaaaagagtgcgagttactgaaagtaaagcaagagcttggaaac
acgtctcaacaaggtattgttgctcagcagcagcctatgcagcaaatgaagagtgaacaa
acaccaattgttgctcagcagcagcctatgccacaaatgaagagtgaacaagcaccaatt
gtcgctctgcagcagcctttgcagcaaatgaagagtcaacaaacacctcacacaaatcaa
acgaatggtgcaactacagcagcaaaagccccagttgttacatttcacatgttacttccg
attttgagacgctacattgacaaagacaaggatatgcaagttcagtccatttttgccaag
ttgcggaaaaatgaagtcagcaaggaacactttttaaaagttgtaaggaatattgttggc
gataaggtgcttaagctagctctttcggaatatcaaatgcagcacactgctcaggcacag
cgaaatactcagacaaatccaggcaactattctttattaagtcaagtttctggtcagcag
actgttcctagtggttctatgacagatgagcaggaggcatatccaggggctcacaccatc
cctatgaaacaagctattgacaacctaagaccacctcaattccggccttccttgtctagc
caagtgcagagtattaggggttattcaccttcacaaagcaatgcacataaggctaatgaa
acaggaaacatgtcagatgggaaaggagctcatatgctacaaacccgtccacccaatacc
ttaactccggcgcaaacaatgcagcatcatgttcagcgtccacaaacaccctcgccaatg
tttgggacaaatagtattcatgcacgtccatttccaagaccagttggaagtccagctgca
tcatttagaccacaaatgacagatcccaatcaaagagcacaattggtccagggagctgtg
accacagtagctgggagtgtgccaacacaatctatagtgtctggaaatgcaccaactaat
caatctacatggcaaaaatcagcaaacaaggagcagaaaactaattctttcactccaaca
gcacatatgaataaggaaactattagccaaaactcggaatcttcgcagaattcttttgtt
gcaatgcatgcaaaacaagtcaatcaagccccaggatcttcaaaaggtggtggtggcatg
gaaaaccagtcaccaaaattgagtgcttctaagtcttcgaccacgacaaactcaagtcag
actcaatctcatgtcactcaagcagagcctaaattgcaggtccaatcttctgtgcaagca
cctcctgcggcagcttctaaaacacctcagaggaaggcatcttctggacagaagaagcct
ctggaagcattaggctcatcccctccaccatctagcaaaaagcagaagacatctggaggt
ttccatgaacaaagcattgaccagcttaatgatgtcacagcagttagtggtgttaatctg
agggaagaagaggaacaacttttctctgctccaaaggaagagagtcgagtttcagaagct
gctcggagagttgttcaactagaagaagaaaagctcattctacagaagggaccactggca
aggaaattagcagaaatcatgaggaaatgtaatttgaaggtcattggcactgatgtggaa
cgttgtctatcgatgtgcgttgaggagaggttacgaggatttataagcgatataataagg
ttctctaaacagagggttgatgttgaaaagtcaaggcatcgtttttatccgttatcctca
gatgttcgcagtcatattatgagggtgaaccgagaagctaaagaacaatgggagaaaaag
caagctgaagatgctgagagaataaggaaacaaaatgattacatgcagggagatggcaat
gcaaatattgatctagaaaaagacaagaacgagacccgtgcctcgtcaaagcatgcaaag
gaggacgatgataagatgagaactacagctgcaaatgttgctgcgcgagttgcagctggt
ggagatgacatgctgtcaaagtggcaattgctagctgaacgaaataaacagagaagtgag
ggaggtgatggttcttctggctctgtaccaggtaacatgttgcaacacaagccatcacta
aaatctgggaaagactcgatggaagatcagggaattgaaaagagaggctactccacaatg
cttggatctggtggtattagaaggtcaccactaacaaaagtggcacggagtgtttcagta
aaagatgtgatagcagcactggagcgagagcctcagatgtcaaaatcctctttacttttc
cagctatacgggaggccattgacagaacctgctgcaaagtaa
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