Setaria italica (foxtail millet): 101761506
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Entry
101761506 CDS
T02818
Name
(RefSeq) uncharacterized protein LOC101761506
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101761506
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101761506
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101761506
mRNA degradation factors
5'-3' decay
Decapping complex
101761506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAT1
Fucose_iso_N2
Motif
Other DBs
NCBI-GeneID:
101761506
NCBI-ProteinID:
XP_004970101
UniProt:
K3XEM1
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Position
V:37929128..37935145
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AA seq
810 aa
AA seq
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MLGVEPDGGGRGGGTSSSAAENFDAGQYAFFGKEPLEGFELGGLEDASGDGNGSGFVGPE
EGLYRLSSVGEEMDDQSNLSDIDDLASTFAKLNRSISGIRNPGVIGDRRSISRGSSLTVD
WTEDVEFSNWVDQDVFENEEFQESKRWWSSNSSVQQGDSNSRPLSRTSSYPQQPLQHRSS
EPIVLPKTSSFTSFPPPAAGGGRSPYPAQGLTRHGSIPSIGAGLQMGSPSMSLSASPYHM
VGPSHGLPYTGGMPYGALNLPVNNPMQNDWSNQANPFTGEHLNLLPNLLHKQLSLPNSPM
SSLLFSQHQQRLAQIQSSHQNYPNIPPHLLYPHHSAEITGRFDSVGSSHSSRDKRSRSGR
GKHNIRFSQPTSDTGGQNGDSGGIKFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQ
ACMAKRGATSKQKNNFSPASMKDLPSKSRSSSDQHTYLQVDALGRVSFSSIRRPRSLLEV
DHPSSGDGSHDQKSTMRPLEKEPMLAARVTVEDALCLLLEVDDIDRLLQSSQSQDNNFQL
KRRRQVLLEGLAASLQLVDPLGPSKSGHSSGLAMKDDVVFLRIVSLPKGRKFLARYLRLL
VPGSELTRIVCMAIFRHVRFLFGGLPSDSSAAETTVALAKTVTSCVHHMELGALSACLAA
VVCSSEQPPLRPLGSSAGDGASLIIKSVLDRATELLTDHHAAASYTVPNRTLWQASFDAF
FGLLTKYCVSKFESIQQMFVMQAPSPVIGPEASKATSKEMPVELLRASLPHTNEQQRQRL
LDFAQRSMPVTGFNPQGARGGHITSESVPG
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgctgggcgtcgagcccgacggtggcggccgcggcggcggcacgtcctcctccgctgca
gagaattttgacgccgggcagtacgccttcttcgggaaggagccactggaggggttcgag
ctcggcggcttggaggacgccagcggcgatggcaatggcagtggattcgttgggccagaa
gaggggctgtatcgtctctcctcagttggagaagagatggatgatcagagtaacttgtct
gacattgatgatcttgcaagcacctttgctaagttgaaccgaagcattagtgggatccgg
aatcctggtgttattggggacaggcgatccatttcaagaggaagttctttaactgttgat
tggactgaagatgtagagttttcaaactgggtagatcaggacgtatttgaaaatgaggaa
ttccaggaaagtaaaagatggtggtcatcaaattcttcagttcagcaaggggactccaac
tccaggccactaagccgaacatcttcctatcctcagcagccactgcagcaccggtcaagt
gaacctatcgttttaccaaagacctcttcatttacctcctttccaccaccagctgctggt
ggtggcagatcaccttaccctgctcaaggccttacacgtcatgggagcattccgtcaatt
ggtgctgggctccaaatgggttctccgagcatgtcactttctgcttctccatatcatatg
gttggaccatctcatgggctaccatacacaggaggcatgccgtatggtgctctcaacctg
cctgtaaacaatccaatgcaaaatgattggtcaaaccaagctaaccctttcactggggag
catcttaatctactgcccaacttattacataaacaattatcacttcctaatagcccaatg
tcatcactcctattttctcagcatcagcagagattggcgcagatccaatcatcccatcag
aattacccgaatataccaccacacctgttatatccccatcactctgcagagataacaggc
aggtttgattctgttggcagctcccattcatcaagagacaagagatcaaggtcagggagg
ggaaaacataacattcgcttctctcaaccaacatctgacactggtggccagaatggtgat
agtggcggcataaagtttagatccaagtacatgtcatctgaagagatcgaatcaatattg
agaatgcagcattccgcaagtcatagcagtgatccttatgtcgttgattactaccatcaa
gcttgtatggctaaaaggggtgccacttctaagcaaaagaataacttctccccagcatca
atgaaagacttaccgtccaagtctcgatccagcagtgatcagcacacatatcttcaggtt
gatgctcttggaagagtatctttctcttccatacgtaggcctcgatctcttcttgaagtt
gaccatccttcatccggtgatggctctcatgatcagaagtccactatgaggcccctggag
aaagaaccaatgctagcagcaagagtcactgtggaagatgccctttgccttcttcttgag
gtggatgacattgaccggctgttgcagtctagccagtcacaggacaacaatttccaacta
aagcgaagacggcaagtcctccttgaaggtctagctgcatcacttcagcttgttgaccct
ctcggacccagcaaatctggtcattcatctgggttagctatgaaggatgatgttgttttt
cttcgcattgtttctctgcccaaaggacgtaaatttttagcacgttaccttcggcttctt
gtccctggcagcgagctgacccggatagtatgcatggctatttttcgccatgtgaggttc
ttgtttgggggtttgccatcagactctagtgcagcagagactacagttgctcttgcaaag
actgttacgtcttgtgtgcatcacatggaacttggtgctcttagtgcctgccttgctgct
gtcgtctgttcatcagaacagccacctctccgccctcttggtagctctgctggtgacggg
gcttctctaattattaaatcagttctggatcgagcaactgagttgctgactgatcatcat
gctgcagccagctacactgtgccaaacaggactctctggcaggcatcatttgatgctttc
tttggacttctgacaaaatactgtgtcagtaagtttgaaagtattcagcagatgtttgtc
atgcaggcaccaagcccagtaattggacctgaggcttccaaagctactagtaaggagatg
cctgttgagctacttcgtgcaagccttcctcatacaaatgagcagcaacgccagaggctt
cttgattttgctcagagatccatgccagtaacaggtttcaatccccaaggtgctaggggt
gggcacatcacttcagaatctgttcctggttga
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