Setaria italica (foxtail millet): 101761781
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Entry
101761781 CDS
T02818
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101761781
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101761781
03110 Chaperones and folding catalysts [BR:
sita03110
]
101761781
03029 Mitochondrial biogenesis [BR:
sita03029
]
101761781
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sita04147
]
101761781
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
101761781
Messenger RNA biogenesis [BR:
sita03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
101761781
Chaperones and folding catalysts [BR:
sita03110
]
Heat shock proteins
HSP60 / Chaperonin
101761781
Mitochondrial biogenesis [BR:
sita03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
101761781
Exosome [BR:
sita04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
101761781
Exosomal proteins of other body fluids (saliva and urine)
101761781
Exosomal proteins of breast cancer cells
101761781
Exosomal proteins of colorectal cancer cells
101761781
Exosomal proteins of bladder cancer cells
101761781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
YIEGIA_cap
Motif
Other DBs
NCBI-GeneID:
101761781
NCBI-ProteinID:
XP_004951187
UniProt:
K3YR06
LinkDB
All DBs
Position
I:179690..184347
Genome browser
AA seq
599 aa
AA seq
DB search
MASPFGTCGLNKPAPAAFATNKHLPPLPSPPVVSIPRKMKMRHQRKCRFTVNAAKEIHFN
KDGSAIRKLQNGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVE
NIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGMITEGVKIVAAGANPVQITRGIEKTAKAL
VNELQKMSKEVEDSELADVAAVSAGNNYEIGNIIAEAMAKVGRQGVVTLEEGKSAENNLY
VVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKINNARDLITILEDAIRGGYPIL
IVAEDIEQEALATLVVNRLRGALKIAAIKAPGFGERKSQYLDDIATLTGGTVIRDEVGLS
LDKADKEVLGTAAKVVVTKDSTTIVGDGTTQEEVNKRVMQIKNQIEATDQEYEKEKLNER
IAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDA
IIETLDNDEQKVGAEIVRKSLSYPLKLIAKNAGVNGSVVIEKVLANKNFRYGYNAATGNY
EDLMAAGIIDPTKVVRCCLEHAASVAKTFITSDAVVVDIQVPEQAPAANPMGGGSGFGF
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgccattcgggacatgtggcctcaacaagccagcacctgctgcctttgccacc
aacaagcaccttccccccctcccttcgccaccagttgtttccatcccacggaaaatgaaa
atgaggcaccagaggaagtgccgtttcacggtgaatgcagcaaaggagatccacttcaac
aaggacggctccgccatcaggaaacttcagaatggcgtcaataagcttgcagatctcgtc
ggggttactcttggaccaaaaggacgaaatgtagtcctggagagcaagtatggctcacct
aaaatcgtcaatgatggtgtcactgtcgcaaaggaggttgagctggaagaccctgttgag
aatattggagctaaattggtccgccaagctgctgctaaaacaaatgatttggccggtgat
gggacaaccacttcagtcgtccttgctcaagggatgattactgagggtgtaaagattgta
gctgctggtgctaatccagtgcagatcacccgtggtattgagaaaacagccaaagcacta
gtcaatgaactccaaaagatgtccaaggaggttgaggatagtgagcttgctgatgttgct
gcagtaagtgctggaaataactacgaaattgggaatattatagctgaggctatggccaag
gttggacggcagggggtggtcacccttgaagaagggaagagtgctgaaaataacctctat
gttgttgagggaatgcagtttgatcgtggttatatttctccctactttgtgactgacagt
gaaaaaatgacagtggagtacgagaattgcaagctgctccttgtggacaagaaaattaac
aatgcaagagatcttatcactattctggaggacgctattagaggtggatatccaattcta
atagtcgcagaggatattgagcaggaagctcttgcaacccttgtggttaataggcttaga
ggtgcattgaagattgctgctatcaaggcccctggttttggagagcgcaagagtcaatac
ctggatgacattgctactctcactggaggtactgtcatcagagatgaagtgggtttgtcc
ttagacaaggcagacaaagaggtcttaggaacggccgccaaggttgtagtaactaaggat
tcaactacaatagttggagatggtactacacaggaggaagtcaacaaaagggtgatgcaa
atcaagaaccagattgaggctactgatcaggaatatgagaaagaaaagctcaacgagagg
attgctaaactgtccggtggtgttgctgttattcaggtgggagctcagacagaaactgag
ctcaaggaaaagaaactaagggttgaagatgcccttaatgctacaaaggcagcagttgag
gaaggtattgttgttggtggtggctgcacccttttaaggcttgcatcaaaagttgatgct
attattgaaacccttgacaatgatgaacagaaggttggagctgaaattgtaaggaagtcc
ttgagctatccacttaaattgattgcgaagaatgcgggtgttaatggcagtgtggttatc
gagaaggtacttgccaataagaactttaggtatggttataatgcagctacagggaactac
gaggatttgatggctgctggtattattgatcccaccaaggttgtgaggtgttgcttggag
catgctgcctcggttgcaaaaactttcatcacttccgatgctgttgtggttgacatccag
gtgcccgaacaagcacctgctgcaaatccaatgggtggtggttcaggttttgggttctag
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