Setaria italica (foxtail millet): 101762016
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Entry
101762016 CDS
T02818
Name
(RefSeq) protein CHROMATIN REMODELING 20 isoform X2
KO
K10779
transcriptional regulator ATRX
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101762016
03036 Chromosome and associated proteins [BR:
sita03036
]
101762016
Transcription factors [BR:
sita03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
101762016
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
101762016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ADD_ATRX
KARI_C
Motif
Other DBs
NCBI-GeneID:
101762016
NCBI-ProteinID:
XP_004982960
UniProt:
A0A368SJP0
LinkDB
All DBs
Position
IX:complement(17720266..17737686)
Genome browser
AA seq
1453 aa
AA seq
DB search
MESVQTNGQLGDDDIIIIDSQSDENKVGAKSSIREDLFKEHKEPVCKTMDNDVNEETSIT
DDDSEADSFEFFVHESDNEQALGSEKDTEVPLTEEEVEELVCEFLEVESKAAQAQESLEK
ESLDKIETEVRLELSERLQGEELESAVSTEMEQFQVQWENELDNLETRSSILLEQLDAAG
IELPRLYKSIESQVPNVCETEAWKSRAHWAGSKVPEEANQSIKKADEYLQSCRPVRRKHG
RLLEEGASGFLAGKIPVGDGDSIQCHERSWSSFNELIKSKESAENTFGSSNWASVYLAST
PQEAAALGLQFPGVDEVEEISEVDGVFDDIKGLDEVELSEEQRRKYRKVKEEDDAKIMNC
LQRRLKGKRMRGTKENFGLVSSCHEKPLSENGVLGAKSDLPSSKKLKIDENKLSIEELFQ
KRSETVIIESDDEMQIDRKPGEGSSARVEKVADIIDLDDPSQSPKLSDKSLPKAFKCTIC
TEILNASEVHRHPVLDVTVCGPCRFLVIEKNRLEDPVSGGYCTWCAQSELLQSCSSCKLL
FCRNCLLKNLGEECLSEAIATGWQCCCCVPSQLEVLISECDKALSGVESSDSESSDTHLS
GPETNGPVSKRRMKKRIRRIMDDTELGEETKRKIAMEKARQDHLKSMQEQSAGKLRSENV
GTSFGAPSEVSLKDAGDGHIVNLAREEDEEPVRIPSSMSFKLKPHQVEGIRFMWENVIQS
VKKVKSGDKGLGCILAHNMGLGKTFQVITFLYTVMKCAQLGLRTALIVTPVNVLHNWRKE
FIRWHPAELKPLRVFMLEDVARVKRPDLLTKWRVKGGVLLIGYSSFRSLSLGKHVKDKNV
ANEITYALQCGPDILVCDEAHMIKNRRADITQALKQVRTQRRIALTGSPLQNNLMEYYCM
VDFVREGFLGSSHEFRNRFQNPIENGQHTNSTSDDVKIMNQRSHILFEQLKGFVQRMSMN
VVKNDLPPKKVFVITVKLSQLQRKLYRRFLDVHGFSSSGYSEKSHSSFFAKYQTLAQVWN
HPGLLQMSKEQRGTLRHEDAVENFMMDESSSDDNTENYFPNGEKQKDRADQQSKKSNFVN
EESNWWEELLDENTYMEADYSGKMILLLDILSKSSELGDKVLVFSQSLTTLDLVEFYLSK
LQIKGKEGKHWKRGKDWYRLDGSTPSSDRQNLVEMFNDPENARVKCTLISTRAGSLGINL
HAANRVVLLDGSWNPTHDLQAIYRVWRYGQTKPVYAYRLMAHRTMEEKIYKRQVTKEGLA
ARVVDRQQVSRTISKEEMLHLFEFGEEELMEQNENGSTMTEKPFTSNTSGTSEPVPVDRL
MLNLLSEQTGWIAGYHEHEALLQENEEERLTKEEQDMALSEWEALRKGVRDPERKSNMTA
VPADPNVVRSVKAASRSRQPQQPKVNSNNQKKCNNLTHMLTLRSEGTKAGCTITCNECGQ
EICWETLNRDRTR
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgttcaaacaaatggacagctaggagatgatgatataataattattgactct
caaagtgatgaaaataaagttggagctaaaagtagcataagagaagatctctttaaggag
cataaggagcctgtatgcaaaacaatggacaatgatgtgaatgaagaaacatccattact
gatgacgattcagaggctgactcattcgaattctttgtccacgaatcagataatgaacaa
gctttaggatctgagaaagacaccgaggtacctctaactgaggaagaagttgaagaattg
gtttgtgaatttcttgaagttgagagcaaagcagctcaagcgcaagagtcacttgaaaag
gagtcattggacaaaattgaaactgaagtaagattggagttatctgagaggcttcaagga
gaagagttagaatcagctgtctcaactgagatggagcaattccaggtgcaatgggaaaat
gaacttgataatctggagacccgtagttctattctgctggagcaacttgatgctgctgga
attgaacttcccagactctataagtcaattgaaagtcaagttccaaatgtttgtgaaact
gaagcatggaagagcagggcccattgggctggttctaaagtgcctgaagaagctaaccaa
tccattaaaaaggctgatgaatacctccagtcttgcagacctgtaaggagaaaacatggg
aggttgctggaggaaggtgctagtggctttcttgccggaaaaattcctgttggggatggt
gattctattcagtgtcatgagagaagttggagctcattcaatgaacttattaaatctaag
gagagtgctgaaaatacttttggtagcagtaactgggcatcagtttatcttgcaagtacc
ccccaggaagctgcagcattgggtctccagtttcctggagttgacgaggtggaggaaata
tctgaagttgacggtgtttttgatgatataaaaggtctagatgaagtagaactttctgag
gaacagagaaggaaatacagaaaggtaaaggaagaggatgatgcaaaaataatgaattgc
ctgcagcgtcgtttgaaagggaaaaggatgagaggcactaaggagaattttggtttggtc
tcatcatgccatgagaagcctctatcagaaaatggtgttttgggtgctaaaagtgacctt
ccttcatctaaaaaactcaaaattgatgaaaacaaactttctattgaggagcttttccag
aagagatcggaaactgtgataatagaaagtgatgatgaaatgcagatagatagaaaacca
ggggaaggtagctcagctagagttgaaaaggtggctgatatcattgatcttgatgaccca
tcacaaagccctaagctcagtgataaaagtttgcctaaagctttcaaatgtaccatttgc
actgaaatattgaatgcctctgaggtgcatcgccacccagtactggatgttactgtttgc
ggaccatgcagatttcttgtgatcgagaagaatcgtcttgaggatcctgtatctggtggt
tattgcacttggtgtgcacaaagcgaactacttcaaagttgtagttcttgtaagctgctt
ttctgtagaaattgtttgttgaagaatttaggtgaagaatgcttatcggaagctatagcc
actggttggcagtgttgctgctgtgtacccagtcaactggaagttttaatttctgaatgt
gacaaggccctcagtggtgttgaatcttctgattcagagagcagcgacacacatctttct
ggaccggaaaccaatggtcctgttagcaagcgaagaatgaagaaaaggattagaagaatt
atggatgatacagaacttggtgaggaaactaagcgcaaaattgcaatggagaaggcaagg
caagaccatttgaagtccatgcaagagcaatctgccggcaagttaagaagtgagaatgtt
ggaacttcctttggagccccatcggaagtctctttaaaggatgctggagatgggcatata
gtcaaccttgccagagaggaagatgaggaacctgttaggattccaagcagcatgtctttt
aaactgaagcctcatcaggtagaaggaataaggtttatgtgggaaaatgttattcaatct
gttaaaaaggtgaaatccggggataaaggtcttggctgcattttggcgcataatatgggc
cttgggaaaacctttcaggttattacattcctctacactgttatgaaatgtgctcaattg
ggtttgcgcacagcacttattgttacccctgttaatgttcttcataactggaggaaagag
tttatcaggtggcatccagccgaactgaagcctcttcgtgtttttatgttggaagatgtt
gccagggtgaaaagaccagatttactaaccaaatggcgagtaaaaggcggagtgcttctc
attggttattcatcatttaggagcttatcccttggaaagcatgtgaaggacaaaaatgtc
gcaaatgaaattacttatgctttgcagtgtgggccagacattcttgtatgtgatgaagca
catatgataaagaataggagggctgacattacacaggctctgaaacaagtaaggacacag
agaagaattgcgttaactggatctccgttgcagaataatttgatggaatattattgtatg
gttgattttgttagggaaggctttcttgggagtagccatgaattccgaaacaggttccag
aaccccattgaaaatgggcagcacacaaattcaacatcagatgatgtaaagatcatgaac
caacgatcgcacattttgtttgaacaactgaaaggttttgtccagcggatgagcatgaat
gttgtgaagaatgatctaccacctaagaaggtttttgttattactgtaaagctatctcag
ctgcaaaggaagctatacagaagattcttggatgttcatggtttctcaagtagtggttac
tcagaaaaatctcacagttccttctttgccaagtaccaaacattagcccaggtatggaat
catccagggctcctccagatgtctaaagaacagagaggaactttgcgtcatgaggatgct
gttgagaattttatgatggatgagagttcaagtgatgataatactgaaaattactttcct
aatggagagaagcagaaggatagagctgaccagcagtccaaaaaaagcaactttgtgaat
gaggaaagtaactggtgggaggaacttctagatgagaatacttacatggaggcagattac
agtggcaaaatgattttgctccttgatatcctgtcaaaaagttctgaattgggcgacaag
gtattggtgtttagccagagcttgactaccctggatttagtggagttttatctgtcaaaa
ttgcaaattaaaggaaaagaaggcaaacattggaagcgggggaaggattggtataggctt
gatgggagcactccatcttctgatcggcagaatcttgtggagatgtttaacgaccctgaa
aatgcaagagtgaaatgcacgttgatatcaactcgtgctggatctctgggcattaacctt
catgctgcaaatcgtgtggttcttttggatggatcctggaatccaacacacgatctgcaa
gccatttatcgagtttggaggtatggccagaccaaacctgtatatgcttaccgcctaatg
gcacatcgaacaatggaagagaaaatatataagcgacaggtgacgaaggaaggcctcgca
gcaagggtggtggacagacagcaagtttcaagaaccatctccaaagaagagatgttgcat
ctttttgaatttggtgaagaggaattaatggaacagaatgagaacggttctaccatgact
gagaagccattcacttccaacaccagtggaacttctgaacctgtacctgtcgacagactc
atgctgaacctactcagtgaacaaactgggtggattgctggttaccatgaacatgaagct
ctcctccaagaaaatgaagaggaaaggcttacaaaggaggaacaagacatggccttgtca
gagtgggaggctttgaggaaaggtgtacgtgatcccgagagaaaatcaaacatgactgcg
gttccagcagatcccaacgttgtgcggtcagtcaaggctgcttcaagaagccggcaaccg
cagcaacctaaggttaactccaacaaccaaaagaagtgcaacaacttaacccacatgcta
actctaagaagcgagggcacgaaagcagggtgcacaataacctgtaatgaatgtggccag
gagatttgttgggagactctaaatagagacagaacgagatga
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