Setaria italica (foxtail millet): 101762144
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Entry
101762144 CDS
T02818
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
101762144
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sita03400
]
101762144
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
101762144
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
VWA
Motif
Other DBs
NCBI-GeneID:
101762144
NCBI-ProteinID:
XP_004980986
UniProt:
K4A6L0
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Position
IX:complement(292240..299168)
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AA seq
687 aa
AA seq
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MARNKEALVLLLDVGPSMHGVLQEVKNICSTLVHKKLVYNRSDEVGIVLFGTKETCNELA
KELGGYKHVTVAHDIKVVDEGTSQALQNLPAGSVPGDFLDAVVVGLDMLIRKYGNTKGKR
RLCLITSAQHRLRDPPEGTKEDQVDTIADQMKRHDIKMECIVFREPGIHHNAVMDENDWL
LYQFRNRSVAKVVQVDSPTSLLGALKTRNVLPVTVFRGDLEVSSNFKIKVWVYKKTAEEK
FPTLKKYSDKAPPSDKFASHEVKVDYEYKSVVEPDKVVPPDQRIKGYLYGPQVVPISSAE
WEAVKFKPEKGVKLLGFTDRSSILRHHFMKDVCLFIPEPGNTKATLAVSAIARAMHQMNK
VAIVRCVWRQGQGNVAFGVLTPNISSVNNIQDSFYFNVLPFAEDIREFQFRSFSSLPSSS
QPTDEQQEAADNLVKMLDLAPPGREVLKPEFTPNPMLERFYSYLDLKAKQPDANVPPLER
CLRRITEPDPDVIDQQTPLIQNLGKAFELKENPKKKKARTQDRLAYTGAGDQAKSVAEPS
AEKDGVLVVLYPPTENIGEIRDLHPVQDFEAMLAKRSSSTWVQKAIEEMQKYTTALLENS
RDGDNYSKALECFAALRKACIIEQEPEEFNQFLTKTYERLKKGDVANFFQLLSSKNISLI
SKGEAPDSDVTEEMARSFYLKQEAASE
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcaacaaggaagcgttggttttgctactggatgttggtccttcaatgcatggg
gtgctgcaggaggtcaagaacatatgttcaactctggtgcataagaagttggtttataat
aggagcgatgaggtcggtattgtcctctttggaactaaagaaacatgcaatgagcttgcg
aaggagcttgggggctataagcatgtgacagttgcacatgatattaaagttgtagatgaa
gggacttcacaggctctccaaaacctcccagcaggatctgtccctggtgattttctggac
gctgttgttgttggcttggatatgctgattaggaaatatggtaataccaaaggaaagcgg
cgtctctgtctaatcaccagtgcacagcatcggttaagagatccgcctgaagggactaaa
gaagatcaggtggacaccattgcagaccagatgaaaagacatgatatcaagatggagtgc
attgtcttcagagaaccgggaatccatcataatgctgtaatggatgaaaatgactggttg
ttgtatcagttcaggaatagatcagtagcaaaggtggtccaggttgacagcccaacatct
ctgttgggtgctctgaagacaagaaatgtgcttccagttaccgtcttcaggggagacctg
gaagtgagctccaattttaaaatcaaggtgtgggtctataagaaaacagctgaggagaaa
ttccccactttgaagaagtattcagacaaggctcctccaagtgataaatttgcctctcat
gaagtcaaagtggattatgagtacaaaagcgttgtcgaaccagacaaagttgttccacca
gatcagaggattaagggatacctttatggtcctcaagttgtccctatatcatctgctgaa
tgggaggcggtcaagttcaagccagagaaaggtgtgaagcttctaggatttacagataga
tccagcatattacggcaccactttatgaaagatgtatgcttgtttatacctgaaccaggt
aacacgaaagcaactcttgcagtttccgccatagcaagagcaatgcatcaaatgaacaag
gttgctattgttcgatgtgtgtggaggcaaggtcaagggaatgttgcttttggtgtattg
acgccaaacatttcatcagtgaacaatatccaagattccttctacttcaatgtgctccca
tttgctgaggacatcagagagtttcagttccgatcctttagcagcctgccatcatcatct
cagcccactgatgaacaacaagaagctgcagataacctagtgaagatgttagacctagca
ccacctggaagagaagtcctcaagcccgagttcacaccaaatcccatgttggagagattt
tacagttaccttgatctaaaggcgaagcagccagatgcaaatgtgccaccacttgaaaga
tgtctaaggaggataactgaacctgatcctgatgtcattgaccaacaaacgccattaatc
caaaatttaggcaaagcctttgagctgaaggagaaccccaagaagaagaaagcacgaaca
caggacagactggcatatactggtgctggtgatcaagctaaatcagtagcagagccctct
gcagaaaaggatggggttttggtggttttatatcctccaacagagaatatcggggagatc
agagatttacatcctgttcaagattttgaagccatgctggcaaagagatctagctcaacg
tgggttcaaaaggcaattgaagagatgcagaagtacacaacagctttgttagaaaattcc
cgtgatggggataattactcaaaggcacttgaatgtttcgctgctctgcggaaagcctgc
attattgaacaggaaccagaggaattcaaccagttccttacaaagacttacgaaagattg
aagaagggtgatgttgccaatttctttcagcttctgtcctcgaaaaatatttcacttatc
agcaaaggggaagcacctgatagtgatgtgactgaagagatggcaagaagtttctatcta
aaacaagaagcggcgtctgagtag
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