Setaria italica (foxtail millet): 101762215
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Entry
101762215 CDS
T02818
Name
(RefSeq) protein argonaute 1C isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101762215
03036 Chromosome and associated proteins [BR:
sita03036
]
101762215
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
101762215
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101762215
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
101762215
microRNA pathway
RISC loading complex
101762215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
101762215
NCBI-ProteinID:
XP_004954525
UniProt:
K3YPJ8
LinkDB
All DBs
Position
I:complement(41992011..41999752)
Genome browser
AA seq
1023 aa
AA seq
DB search
MGSRRGRQHPGVGEGSQPPHPQPAGRGGGRGGNQGRGGGRSARADEAQQQPPPPRGEHPG
RGHARGGTRPLPQQYPRAARPGQGAGPSATGSSSPLAPELRQAMEAPHELAQASPLHAGP
SQSQPQIEEHKLAEASAGSEIAPAIPSSSKSVRFPLRPGKGSVGTRCLVKANHFFAQLPD
RDLHQYDVSITPEVTSRILSRAIIKELVNLHRQSHLGGRLPAYDGRKSLYTAGALPFTSQ
EFHITLLDDDDGSGSERRRRSFKVVIKFAARADLHRLEMFLAGRHAEAPQEALQVLDIVL
RELPSARYAPFGRSFFSPVLGRRQPLGDGLESWRGFYQSIRPTQMGLSLNIDMSATAFIE
PLPVIEFVAQLLNSDIHSRPLADAERVKIKKALRGVKVEVTHRGNMRRKYRISGLTTQAT
RELTFPVDEGGTMKSVVQYFQETYGFAIQHTYLPCLQVGNQQRPNYLPMEVCKIVEGQRY
SKRLNQNQIRALLEETCQHPRDRERDIIRMVKHNAYEKDDYAQEFGIKISDRLASVEARI
LPAPRLKYNETGREKDCLPRVGQWNMMNKKMVNGGKVRSWICVNFARNVQESVVRGFCHE
LALMCQASGMDFSREPVLPPLYARPDQVERALKARYHDAMNVLGPQRRELDLLIGILPDN
NGSLYGDLKRVCEIDLGIVSQCCCTKQVFKMNKQILANLALKINVKVGGRNTVLVDAVSR
RIPLVTDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIE
DLYKVWQDPQRGTVSGGMIRDLLISFKKSTGEKPQRIIFYRDGVSEGQFYQVLLYELHAI
RKACASLEANYQPKVTFVVVQKRHHTRLFAHNHNDQNSIDRSGNILPGTVVDSKICHPTE
FDFYLCSHAGIKGTSRPAHYHVLWDENNFSADELQTLTNNLCYTYARCTRSVSIVPPAYY
AHLAAFRARFYMEPETSDSGSVASGPAGRGQQPTSRSARPPGGAAVRPLPALKDNVKRVM
FYC
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgaggaggggaaggcagcatcctggtgttggcgagggctcacagcccccgcat
ccgcagcctgctggaagaggaggcggtcgtggtgggaatcaggggcgcggtggagggcgt
tcagctcgtgctgacgaggcccagcagcagccgccgccgccgaggggagagcatccgggc
aggggacatgctcgtggtggaacacggccgctgccgcaacagtacccacgtgctgctagg
cctgggcagggggctggcccgtcagccaccggatcatcgagccctttagctcccgagctg
cgccaagcaatggaagctcctcacgagcttgctcaagcctcaccactgcacgcaggtcct
tcacaatcacaaccacagattgaggagcacaagctcgccgaggctagtgcaggcagtgag
attgcgcctgcgattccttcatcaagcaagtcggtcaggtttcctttgcgcccaggaaaa
ggtagcgttggcaccaggtgtttggttaaggccaatcatttctttgcgcaactgccagac
agggatcttcatcagtatgatgtctcaatcacaccagaagtcacgtcacgaatccttagt
cgagccataatcaaggagttggtgaatctccacaggcaatctcatttgggtgggcgcctt
ccagcctatgatggtaggaagagcctgtacacagctggcgcgttgccgtttacttcccag
gaatttcatatcactttacttgatgatgatgatggctctggttccgagaggcgacgtagg
agttttaaggtagtcattaaatttgctgcacgagccgacctccaccgtctcgagatgttt
ttagctgggaggcatgcagaagctcctcaagaggcattgcaagttcttgatattgtgctg
cgggagctgccttctgcaagatatgcaccatttggccggtcgttcttttcgcctgtcttg
ggccgaaggcagccccttggcgatggattagaaagctggcggggattttatcagagcatc
aggcctacccagatgggcttgtcactgaatatcgatatgtcagcaacggctttcattgag
ccattacctgtaattgaatttgttgcacaactgctgaattctgacattcactctaggccc
cttgcagacgcagaacgtgtgaagatcaagaaggccttgagaggagttaaggtggaagtt
actcatcgtggcaacatgcggagaaagtatcggatatctggattaactactcaggcgact
cgagagttaacttttcctgttgatgaagggggtacaatgaagtcagttgtacaatacttt
caagagacatatggctttgccatccaacacacctaccttccttgccttcaagttggcaat
caacagcgtccaaattacttgcccatggaggtctgcaaaatagtggagggacagaggtac
tccaagagattaaaccaaaatcagataagggctcttttggaggagacatgccagcaccca
cgtgatcgtgaacgtgatataattcggatggttaaacataacgcctatgagaaggatgat
tatgcgcaagagtttggcattaagattagcgatcgtctggcatcagtagaggcacggatt
ttaccagctccacggcttaagtacaatgagactggtcgagagaaggattgcttgcctaga
gttggtcagtggaatatgatgaacaagaaaatggtaaatggtggtaaagtcagaagctgg
atatgtgtcaatttcgcccgcaatgtgcaagagagtgttgttcgtgggttctgtcatgaa
cttgcactgatgtgccaagcgtcaggaatggacttttctcgggagcctgttcttccacct
ctatatgcacgtcctgatcaagtggagcgagctctgaaagctaggtaccatgatgccatg
aatgttcttggaccccaacgcagggaacttgatttacttatcggaatactacctgacaat
aacggctcactttacggtgatttgaagcgtgtatgtgaaatagatcttgggatagtttca
cagtgctgttgtacaaagcaggtgttcaaaatgaacaaacaaattcttgcaaatcttgct
ctgaagataaatgtcaaggttgggggcaggaacaccgtactggtagatgcagtctcaagg
cggattcctctggtaactgacagacctacaatcatatttggtgctgacgtgactcatcct
catcctggagaggacagcagtccctcaattgctgctgttgtggcctcccaagattggcca
gaggtgacaaagtatgctggattagtgtctgctcaagctcatcgtcaagaattgatagag
gatttatataaggtctggcaagacccacagagagggacagttagcgggggaatgataagg
gatctacttatatccttcaaaaaatcaactggggagaagccccagcgaataatattttac
agggatggtgttagtgaaggacaattttatcaagttctgctgtatgagctccatgcaatc
cgaaaggcatgtgcctccctggaagcgaactaccaaccgaaggtgacttttgttgtggtt
cagaagcgccatcataccagattatttgctcacaaccacaatgatcaaaattcaattgac
aggagtggaaacatactcccaggtacggttgtagattcgaagatctgccatcctactgag
tttgacttctacttgtgcagccatgctggcattaagggcactagtcgtccagctcattat
catgtcttgtgggatgagaacaacttctctgctgatgagttgcagactcttaccaacaac
ctctgttacacttatgcaaggtgcacacgctctgtatcaatcgttccaccggcgtattat
gctcacctggctgccttccgagctcgtttctacatggaaccagagacctctgacagtggt
tctgtggcaagtggtcctgcaggccgtggacagcagccaacatcccgcagcgctcggccc
cctggtggtgcagctgttaggccacttccagctctgaaggataacgtaaaaagggtcatg
ttctactgctga
DBGET
integrated database retrieval system
