Setaria italica (foxtail millet): 101762458
Help
Entry
101762458 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 32 kDa subunit C-like
KO
K10739
replication factor A2
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03030
DNA replication
sita03420
Nucleotide excision repair
sita03430
Mismatch repair
sita03440
Homologous recombination
sita03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101762458
03420 Nucleotide excision repair
101762458
03430 Mismatch repair
101762458
03440 Homologous recombination
101762458
03460 Fanconi anemia pathway
101762458
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sita03032
]
101762458
03400 DNA repair and recombination proteins [BR:
sita03400
]
101762458
DNA replication proteins [BR:
sita03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101762458
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101762458
MMR (mismatch excision repair)
101762458
DSBR (double strand breaks repair)
HR (homologous recombination)
101762458
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
RMI2
tRNA_anti_2
DprA_WH
HTH_IclR
Phage_P2_GpU
Motif
Other DBs
NCBI-GeneID:
101762458
NCBI-ProteinID:
XP_012700784
LinkDB
All DBs
Position
IV:37130973..37135373
Genome browser
AA seq
348 aa
AA seq
DB search
MAAAASSYFAGPAIMPSQRAAAAPDNSAAASTPSAAKSRDPRFAGCAPATVRHIARSFAA
AAAVAGPPAAGDPVVSIDGVDATNVWVXGRVVNMASMEAGVSFTLDDGTGKIALVRWIAD
QMDAKEAAFVQNGMYLKVQVTLVGFQAKQQGFARSIRPVTNFNEVVLHFIECIHVHLENV
RPKMQGLLPRSVQPNASTHEMQGHVPHGVQTNAPAYTPFSGGVREHQVHFSPEVNQGLFP
PSTQTNTSTHVPFSGGVRGQQVHSTSRPNQFSAYPGTGGQQRDLQRMVMEVMQQPDILAH
ENGVHVDEVARRLGMPRAQILATALQLVDLACLYSTIDDYHFRSTLNG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgcggcttcctcctacttcgcgggcccggccatcatgccgtcgcagcgcgcc
gccgcggcgcccgacaactccgccgccgcctccaccccttccgcggccaagtcgcgcgac
ccccgcttcgccggatgcgcgcccgccaccgtccgccacatcgcccgctccttcgccgcc
gcggcagccgtcgccggtccgccggcggcgggcgaccccgtcgtctccattgacggcgtc
gacgccaccaacgtttgggtgnntgggagggtggtgaacatggcgagcatggaggctggc
gtgtcgttcacgctcgacgacggcactgggaagatcgcgctcgtgcggtggatcgctgac
cagatggatgctaaggaggcggcttttgtccagaatggaatgtacctcaaggttcaagtg
acacttgttgggtttcaagctaagcagcagggttttgctcgttctatcaggcctgttacc
aatttcaatgaagtggtgctgcatttcatcgagtgtatacatgtgcatttggaaaatgtc
cggccaaagatgcaaggtctactccctcgctctgttcaaccaaatgcatctactcatgag
atgcaaggtcatgtccctcatggagttcaaacaaatgcacctgcttatacgcccttttct
ggtggagttagagagcatcaagttcatttttctcctgaagtaaaccaagggctatttcct
ccgtctactcaaacaaacacatctactcatgtacctttttctggtggagtgagaggacag
caagttcattctacttctcgacccaaccaattttcagcttacccaggtactggtggacaa
cagcgagatctgcagagaatggttatggaagtaatgcaacaaccagatatacttgcacat
gaaaatggagtacatgttgatgaagtggcaaggagacttggaatgccaagagcacaaatt
ttggccaccgccctgcagctggtcgatttggcctgcctttattccactatcgacgactat
catttcaggtctactttaaatggctga
DBGET
integrated database retrieval system
