Setaria italica (foxtail millet): 101762996
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Entry
101762996 CDS
T02818
Name
(RefSeq) cleavage stimulating factor 64
KO
K14407
cleavage stimulation factor subunit 2
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101762996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101762996
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
101762996
U7-dependent histone pre-mRNA processing factors
101762996
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
DUF6604
RRM_7
Motif
Other DBs
NCBI-GeneID:
101762996
NCBI-ProteinID:
XP_004987187
UniProt:
K4AIP1
LinkDB
All DBs
Position
IX:56766449..56767342
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AA seq
235 aa
AA seq
DB search
MDGTMSTSLAAAAANCRCSRVVFVGNIPFHASEKELRDACELIGPLRSLRLAADPATGKR
KGYAFVEYPDDETARSACRNLDGHPLRGRELRVGLAGRHRRRRPRGDSEPVGLEDAIHAA
SLVAGTPPLDSVTRFLAARSARELREMVAALEGDGPDTLKLLEEHVPGLATVMEQVRHLL
DMAAADEAAEEAKNKKRAAAAESTDDHRAKFAKVEVEDGGFKHKIAVSAVGVTCF
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggacggcaccatgtctacgtccctggctgccgccgccgccaactgccggtgcagccgc
gtcgtgttcgtcggcaacatcccgttccacgcctccgagaaggagctccgcgacgcctgc
gagctgatcggccccctccgctccctgcgcctcgccgccgacccggccaccggcaagcgc
aagggctacgccttcgtcgagtaccccgacgacgagacggcgcgcagcgcctgccgcaac
ctcgacggccaccccctgcgcggccgcgagctccgcgtcggcctcgccggccgccaccgc
cgccgccgccccaggggcgacagcgagcccgtcggcctggaggacgccatccacgccgcg
tccctcgtcgccgggacgcccccgctcgactccgtcacgcggttcctggcggcgcggtcg
gcgcgggagctgcgggagatggtggccgcgctggagggcgacggccccgacaccctgaag
ctgctcgaggagcacgtcccgggattggccacggtcatggagcaggtgcgtcatcttctg
gacatggcggccgcggatgaagctgcagaggaggccaagaacaagaagcgggcggcggcg
gcggagtccaccgacgatcaccgcgccaagttcgcgaaggtggaagtggaagacggcggc
ttcaagcacaagatcgcggtctctgctgtcggcgtcacgtgtttctga
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