Setaria italica (foxtail millet): 101763247
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Entry
101763247 CDS
T02818
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00040
Pentose and glucuronate interconversions
sita01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101763247
Enzymes [BR:
sita01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101763247
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101763247
NCBI-ProteinID:
XP_004964534
UniProt:
K3XWZ3
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All DBs
Position
IV:complement(2180966..2182607)
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AA seq
438 aa
AA seq
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MAALIIRSPLLSILFYYVLATAVAAAAAAAASNVTSDEEYWAERAEEARANNRAAYVSDP
IAAMNRFNTETLRATTRRSLRRYQGPCAATNPIDSCWRCRADWATDRQRLALCARGFGHK
TTGGAGGKIYIVTDASDDEMIIPRKGTLRYGVIQGRPLWIVFARDMVVRLRQELIVSDNK
TIDGRGAQVHITGAQITLQSVSHVIIHNVHIHHSAPHSGGIIRDSKRHYGLRTRSDGDGI
SVLSSSNVWIDHVSMYRCSDGLIDVVNGSTGITVSNSHFTKHDHVMLFGASNDNPQDRMM
QVTVAFNHFGKGLVQRMPRCRYGFFHVVNNDYTHWQMYAIGGNKNPTIISQGNRFIAPDD
PNAKEVTKREYTPYSEYKDWVWKSQGDVMMNGAFFNESGGQNERKYDQLDFIPARHGSYV
GELTKFAGTLNCRAGKPC
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctaataatcaggagcccccttctgtccattctcttctattacgtcctcgcc
acggccgtcgcggcggcggcggcggcggcggcgtcgaacgtcacctccgacgaggagtac
tgggcggagcgggcggaggaggcccgggcgaacaaccgcgccgcctacgtcagcgacccc
atcgccgccatgaaccgcttcaacacggagacgctccgggccacgacgcggcggtcgctg
cggaggtaccagggcccgtgcgcggcgacgaaccccatcgacagctgctggcggtgccgc
gccgactgggccaccgaccggcagcggctggcgctgtgcgcgcgcgggttcgggcacaag
accaccggcggcgccggcggcaagatctacatcgtcacggacgcgagcgacgacgagatg
atcatcccccggaagggcaccctccggtacggcgtgatccagggccggccgctgtggatc
gtgttcgcgcgcgacatggtggtgcggctccgtcaggagctcatcgtgagcgacaacaag
accatcgacggccgcggcgcgcaggtccacatcaccggcgcgcagatcacgctgcagagc
gtgtcgcacgtgatcatccacaacgtgcacatccaccactcggcgccgcactcggggggc
attatccgggactcgaagcgccactacgggctgcgtacccggagcgacggcgacggcatc
tccgtgctctcgtccagcaacgtctggatcgaccacgtgtccatgtaccggtgctccgac
gggctcatcgacgtcgtcaacgggtccacggggatcaccgtctccaacagccacttcacc
aagcacgaccacgtgatgctgttcggggccagcaacgacaacccgcaggacaggatgatg
caggtcaccgtcgccttcaaccacttcggcaaggggctcgtgcagcggatgccgcgctgc
cgctacggattcttccacgtcgtgaacaacgactacacgcactggcagatgtacgccatc
ggcggcaacaagaaccccaccatcatcagccaggggaaccggttcatcgcccccgacgac
cccaacgccaaggaggtgaccaagagggagtacacgccctacagcgagtacaaggattgg
gtgtggaagtcgcagggggacgtcatgatgaacggggccttcttcaacgagtccggcgga
cagaacgagcgcaagtacgaccagctcgacttcatcccggcaaggcacggaagctacgtc
ggcgagctcaccaagttcgccggcacgctcaactgccgcgccggcaagccgtgctag
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