Setaria italica (foxtail millet): 101763429
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Entry
101763429 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
101763429
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sita04040
]
101763429
Ion channels [BR:
sita04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
101763429
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Ion_trans_2
TMEM95
Motif
Other DBs
NCBI-GeneID:
101763429
NCBI-ProteinID:
XP_012703575
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Position
I:39399539..39409161
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AA seq
765 aa
AA seq
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MTDQERDDVPMLLRNVELPRFPLRSTSMCIPVRDDEYEEGTFVPHTGPLFIQPPTQTTSG
SPFTSRDAPDRLPRPSQGKPVSKPQAVMPEQTGGTRWSYSGQVPKNEHLLMSGPLGQCDN
PDCVNCPPACKNKRHFHRGSNAEDNKLHNILYGYGGGWKKKIEQILSRIPIMNPHAKPVQ
HWNQFFVISCLIAIFIDPLFFFLLSVEQDNKCIVLNWDFATALAVLRSVTDAIYFLHMLL
QFRLAYVAPESRVVGAGDLVDEPKKVAIHYLRGYFLLDFFVVLPLPQVMILLVIPKYVGL
SGANYAKNLLRATVLLQYVPRIIRFVPLLDGQSANGFIFESAWANFVINLLMFVLAGHVV
GSCWYLFGLQRVNQCLRDACSASTIPYCDTFIDCGRGVGSGLYRQQWFNDSGAAACFNTG
NGATFQYGIYGQAVLLTTEESAVKRYIYSLFWGFQQISTLAGNLVPSYFAWEVLFTMAII
GLGLLLFALLIGNMQNFLQALGRRRLEMQLRRRDVEKWMSHRRLPEDLRRRVRRAERFTW
AATQGVNEEELLSNLPEDIQRDIRRHFFRFLNKVRLFTLMDWPILDAICDKLRQNLYISG
SDILYQGGPVDKMVFIVRGKLESVSADGSKAPLHDGDVCGEELLTWYLENSSVNRDAGKI
KFQGMRLVAIRTVTCSTNVEAFVLRASDLEEVTSQFARFLRNPRVQGAIRYESXYWRTIA
ATRIQVAWRYRKRRLKRAEQSRLNEESYPSYSITAFDSFRRGQRG
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcaggagagagatgatgttcctatgttactaagaaatgttgaactaccaaga
tttcctctaagaagcacttcaatgtgtataccagtaagggatgatgaatatgaagaaggc
acctttgtaccccatactggtcctttattcattcagccaccaactcagacaacatcgggc
agtccatttaccagtagagacgcaccagataggctgcctagaccttcacaggggaaacca
gtcagcaagccacaggcagtcatgccagaacaaaccggaggaactaggtggtcttacagt
ggacaagtgccaaagaatgaacacctactgatgtctggacctttgggacaatgtgataat
cctgattgtgtcaattgccctcctgcttgtaaaaataaaagacatttccacagaggttcg
aatgctgaagacaataagcttcataatattctttatggttatggtggtggatggaagaaa
aagatcgagcaaattctttcacgcattccaattatgaacccacatgcaaagcctgttcaa
cactggaatcaattcttcgtgatatcatgcctgattgccattttcatcgatccactgttc
ttcttcctattatcagtagagcaggataataaatgcatagtgttaaactgggattttgct
acagcacttgctgttttgagaagtgtgaccgatgctatttatttcctccacatgctgctt
caattcagattggcttatgttgccccagagtcacgtgtggtgggagctggagacttggtt
gatgagccaaagaaagttgctatccattatcttcgtggttactttttacttgattttttt
gttgtgcttccactccctcaggtgatgatactgctagttatccctaaatatgttgggtta
tcaggtgcaaactatgctaagaatttattgcgtgccactgttcttcttcaatatgtgccc
cgtatcatcagatttgtaccgctacttgatggtcagtccgccaatggattcatattcgag
tcagcatgggctaattttgtgatcaaccttctaatgtttgttttggcgggacacgttgtt
ggttcatgttggtatctctttggcttacagagggttaaccaatgtctacgagatgcttgt
tctgcatcgaccattccttattgtgatacttttatagactgtggacgtggcgttgggagt
ggactgtacagacagcagtggttcaatgactcaggtgcagcagcttgttttaacactgga
aatggtgctactttccaatatggaatctatgggcaggctgttttactaactacagaagaa
agtgctgttaaacggtatatatattcattattttgggggtttcagcaaataagtacctta
gctggcaaccttgtcccaagttactttgcatgggaagttctgttcacgatggctattatt
ggtttgggactgttgctttttgcattacttatcggaaacatgcaaaactttctccaagct
cttggaagacggagattggaaatgcaacttaggcgccgcgatgttgaaaagtggatgagc
cataggcggttgcctgaagatttgagaaggagggttagacgagcagaaaggttcacctgg
gcagctactcaaggagtgaatgaagaggagcttttgagtaatttacctgaagatatccag
agggacatacgtcgtcatttctttagattccttaataaggtccgattgttcaccttgatg
gattggcctatcttggatgctatctgtgacaaattaagacaaaacttatatatcagtgga
agtgacattctttatcaaggtggtcctgttgacaagatggtcttcatagtgagaggtaag
ctggaaagcgtcagtgcagatggaagcaaggctccgttacatgatggagatgtatgtgga
gaggagctcctcacatggtacttggaaaactcatcggtgaatagagatgctgggaaaatc
aaatttcaaggcatgcggttggttgctatacgtacagtaacatgttcaacaaatgttgaa
gcttttgtactcagagcaagtgatctcgaagaagtcacctcgcaatttgcacgatttttg
cgtaatccacgagtgcagggagcgatcaggtacgaatccncctactggcgaactattgct
gcaactcgaattcaagttgcatggaggtataggaaaaggcggctgaagcgagctgagcag
tcaaggctgaacgaggagtcttacccctcgtactcgatcacggcgtttgattcttttcga
cgtggacagaggggatga
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