Setaria italica (foxtail millet): 101763753
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Entry
101763753 CDS
T02818
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101763753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101763753
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101763753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101763753
NCBI-ProteinID:
XP_004979810
UniProt:
K3ZID6
LinkDB
All DBs
Position
VIII:35551601..35555555
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AA seq
461 aa
AA seq
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MEADAGKLFIGGISWDTNEDRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVA
EQVIMEKHMIDGRMVEAKKAVPRDDQHALSKSGGSAHGSPGPSRTKKIFVGGLASTVTEA
DFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKTFHELNGKMVEVKR
AVPKELSPGPSMRSPVGGFNYVMGRANILNGYTQGYNPSPVGGYGMRMDARFGLLSGGRS
GYPSFGGSYGIGMNFDPGMNPGIGGGSSFNNSVQYGRQLNPYYSGNSGRFNSSVGYGGVN
DNNGSVFNSLARNLWGNSGLNYSSNSASSNTFVSSGNGGLSGIGNNNVNWGNPPVPAQGA
SGGSGYGTGNFGYGSSENNFGLGSSAYGRNAGSGGVNTFNQSTNGYARNFGDSSAPGGSI
YGDTTWRSGSSELDGTSPFGYGLGNSASDVTAKSSAGYMGH
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggacgccgggaagctgttcatcggcggcatctcgtgggacaccaacgaggac
cgcctccgggagtacttcgacaagtatggggaggtggtggaggccgtcatcatgcgcgac
cgggccaccggccgcgctcgaggcttcggcttcatcgtgttcgccgaccccgccgtcgcc
gagcaggtcatcatggagaagcacatgatcgacggccggatggtggaggcgaagaaagct
gtccccagggatgatcagcatgctctcagtaagagcggtggcagtgctcatggatcaccg
gggcctagccgcacgaagaagatattcgttggtggtttggcttccaccgtgaccgaggcg
gacttcaggaagtattttgaacagttcgggacgatcactgatgttgtcgtgatgtatgac
cacaacacacagcgtcctagagggtttgggttcatcacctatgattcagaagatgccgtg
gacaaggcattgttcaagacgttccatgaactgaatggtaagatggttgaggtcaagcgt
gctgttcctaaggaactatcacctggacctagcatgcgctctcctgtaggtggattcaac
tatgtcatgggtagagccaatatcctcaatggatatacccaaggttacaatccgagccca
gtgggtggctacgggatgaggatggatgcaaggtttgggcttctgtcaggcgggcgcagt
ggttatccatcttttggtggtagttacggaattggtatgaattttgacccagggatgaac
ccaggtattggaggtggctctagtttcaacaatagtgtccagtatggacggcagcttaat
ccatactacagtggaaattctggtagattcaatagcagcgttggctatggtggagtgaat
gataataatggatcagtgtttaactcactggctcgtaatctatggggtaattcggggctt
aattactcttccaactctgcaagctctaataccttcgtgtcatctggaaatgggggcctt
agtggaattgggaacaacaatgtgaactggggaaaccctcctgtgcctgctcaaggtgct
agtggtggctctggttatggtactggaaactttggctatggatccagtgaaaacaacttt
ggtctgggttccagtgcctatggaaggaatgctggatcaggtggtgtcaataccttcaac
caatcaaccaatgggtatgcaaggaactttggagattcatcagcacctggtggctctatc
tatggagacacaacatggagatctggatcttccgagcttgatggaaccagcccatttggt
tatgggcttggaaattcagcttcagatgttacagcaaagagctcagcaggttacatgggg
cattga
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