Setaria italica (foxtail millet): 101764789
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Entry
101764789 CDS
T02818
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
101764789
Enzymes [BR:
sita01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
101764789
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
101764789
NCBI-ProteinID:
XP_004974168
UniProt:
A0A368RQ78
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Position
VI:complement(35477919..35482471)
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AA seq
658 aa
AA seq
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MGKLSCRSLCCMGPPSPAGAGAVDATDGVRVKVSNRYVEIKNGIFELTLSNPDGIVTGVR
YNGVDNLMEILNKEDNRGYWDLVWNPPGQKTGIFDVIKGTEFRIIYHDENQAEVSFTRNW
DPSLEGKAVPLNIDKRFIVLRGSSGFYTYGIYEHKEGWPDFGLGETRVAFKLRKDKFHYM
ALADNRQRIMPMPDDRLPPRGQPLAYPEAVLLVDPINPDLRGEVDDKYQYSCEDQCNNVH
GWMSFDPPIGFWQITPSDEFRTGGPLKQNLTSHVGPTTLAMFLSAHYAGDDLSPVFTNGE
YWKKVHGPVFMYLNSSWDGSDPTMLWEDAKVQMMIEKESWPYSFALSEDFQKTEQRGCIS
GRLLVRDRYIDDEDLYASGAYVGLALPGEVGSWQRECKGYQFWCRADVDGSFYIRSIVTG
NYNLYAWVPGFIGDYRLDATLTIASGDDIYLGDLVYEPPRDGPTMWEIGVPDRSAAEFYV
PDPNPNYINRLYINHPDRFRQYGLWERYAELYPDSDLVYTIGQSDYSTDWFYAQVNRKVD
DNTYQPTTWQIKFTLDSVSPGSTYKFRVALASSARAELQVFFNDQNRGVPHFATGLIGRD
NAIARHGIHGLYWLFNINVDSAWLVQGMNTIYLKQPRNQSPFQGLMYDYLRLEGPCGC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcttagctgcaggagcctctgctgcatgggccctccgtcgccggccggcgcc
ggcgccgtcgacgccaccgacggcgtcagggtcaaggtcagcaaccgatatgttgagata
aaaaatggcatctttgagctgacgctgtccaacccggacgggatcgtgaccggcgtgcgc
tacaatggtgtggataatctcatggagatccttaacaaggaagacaacagagggtactgg
gaccttgtttggaacccaccaggacagaaaaccggcatctttgatgtgatcaaaggcact
gagttccgcatcatataccacgatgaaaaccaggctgaggtctccttcaccagaaattgg
gatccttcccttgaaggcaaagctgtccccttgaacatcgataagaggttcatcgttctc
cggggttcttcaggattctacacctatggaatctatgagcataaggaaggatggcctgac
tttggcttgggagagacgagggtggctttcaagctccggaaagacaagtttcattacatg
gcattggctgacaacaggcagagaattatgccaatgcccgatgaccgactgcctccccga
ggccagccattagcataccctgaggccgtgctccttgtggacccaatcaatcctgatctc
agaggggaggttgacgacaagtaccagtactcttgcgaggaccagtgcaacaatgtccat
ggatggatgtcattcgatcctcccatcggcttctggcagatcactccaagtgatgagttc
aggacaggaggacccctgaagcagaatttgacctctcatgttggccccactacgctggct
atgtttcttagcgcacattatgcgggggatgacctttcacccgtgtttacgaatggagaa
tactggaaaaaggtccatggaccggtattcatgtaccttaattccagttgggacggaagt
gacccaactatgctctgggaggatgcaaaagttcagatgatgattgagaaagaaagctgg
ccatatagtttcgcactttcagaggattttcagaagactgagcaaagaggttgcatctct
ggtagattactagttcgagacaggtatatagatgatgaggacctttatgcctccggagcc
tatgtaggcttggccctaccaggagaagttggatcctggcaaagagagtgcaagggatac
caattctggtgtagagcagacgtagatgggagcttctacataaggagcattgtaactggg
aactacaacctgtatgcatgggttcccggtttcataggggactacagattagatgctaca
ctgaccatagcttcaggggatgatatttatctgggtgaccttgtgtatgaaccaccaaga
gacggtccgacgatgtgggagattggagtacctgatcgatctgccgctgagttctatgtc
ccagaccctaaccccaactatatcaatagactgtacatcaaccaccctgacaggtttagg
caatacggactttgggaacgatatgcagaactatacccagacagtgatctggtgtacaca
atcggccagagcgactatagcaccgattggttctatgctcaagttaacagaaaagttgat
gacaacacttaccaaccaactacatggcaaatcaagttcactcttgacagtgtgagtcca
ggcagcacctataagttccgagtggcgcttgcgtcttcggcacgcgctgagttgcaggtt
ttctttaacgatcagaacaggggtgttcctcacttcgccaccgggctgatcggcagggac
aacgccatagcaagacatgggatccatgggctatactggctgttcaacatcaatgtggat
agtgcctggcttgtccaagggatgaacacaatctacctgaagcagcccaggaaccagagc
ccatttcaggggctgatgtatgactacttgcgtttagagggaccgtgtggctgctaa
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