Setaria italica (foxtail millet): 101765259
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Entry
101765259 CDS
T02818
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101765259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101765259
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
101765259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ELL
zf-RING_13
DUF1258
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
101765259
NCBI-ProteinID:
XP_004983298
UniProt:
A0A368SLD1
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Position
IX:26456980..26466513
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AA seq
531 aa
AA seq
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MGSADLVLKPACEGCGNTSDLYGTGCKHTTLCSECGKSMARSRARCLVCSSPITRLIREY
NVRANAITDKTYSIGRFVTGLPPFSKKKSAENKWSLHKEGLQGRQIPENMREKYNRKPWI
LEDETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWYNFSKIAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAAANGPAAFGSDIKKLEATNSGEKESGRPKKAKNNEEGNNS
DKGEEDEEEEAARKNRLGLTKKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEA
VDIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNDSDADEDE
EEEDQEDESSPVLAPKQKDQVKDEPVDNSPAKQTPSGHARSTPPASKFKQKRKSGADDTK
TSGGAASKKAKVESDTKASGIKEEAPASAKPTSKTSASSKSGTNVSPVTEDEIRSVLLAV
APVTTQDLVSRFKSRLRGPEDKNAFAEILKKISKIQKTNGHNYVVLRDDKK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcggacctggtactcaagccggcgtgcgagggctgcggcaacacgtcggac
ctctacggcacggggtgcaagcacaccacgctatgcagcgaatgcggcaagtccatggcg
cgctcacgcgctcgctgtctcgtctgctcctcgcccatcaccaggctcatccgggaatat
aatgtacgagctaatgctattacggataagacatactctattggaagatttgtcactggt
ttacctcctttctcgaagaagaagagtgctgagaacaagtggtctcttcataaggagggt
ctacaaggacggcagatacctgagaatatgcgggagaaatacaacaggaaaccatggatt
ttggaagatgaaacaggccagtatcagtatcaaggtcaaatggaaggatcacagtcagct
acagctacatattatttgttaatgaggcacggcaaggaatttaatgcatatcctgctggt
tcttggtataacttcagtaaaattgcacagtacaaacaactaacactggaggaggctgaa
gaaaagatgaataagaggaagaccagtgcaactggttacgaacgttggatgatgaaagca
gctgcaaatgggccagctgcctttggttcagacattaagaaacttgaggccacaaacagt
ggggaaaaagaaagtggtcgtcctaagaaagcaaaaaataacgaggaaggtaataattct
gataaaggtgaggaggatgaagaagaggaagcagcacgcaagaataggctcggactcact
aaaaaaggcatggatgatgatgaggaaggtggaaaagatctagacttcgatttggatgat
gaaattgagaaaggtgatgactgggagcatgaagaaacattcacagatgatgatgaggct
gtagatatcgatccagaggaacgggcggatttagctcctgaaattcctgctccacctgaa
attaagcaggatgatgaagagaacgaagaagaaggtggcctgagcaagtctggcaaggaa
ttaaaaaagctgcttgggcgcgctgctggactaaatgattcagatgctgacgaggatgaa
gaagaagaagatcaggaagacgagtcatctccagtgcttgctccaaaacagaaggatcaa
gttaaggatgaacctgtagataacagcccagctaaacaaacaccatcaggacatgctcgc
agcacacctcctgcttccaaattcaagcaaaagagaaaatcaggtgctgatgatacaaaa
acttctggtggtgcagcttcaaagaaagcaaaggtggaatcggatacgaaagcatcgggc
attaaagaggaagcaccagcttcggcaaaacctacatcaaagacctctgcttcatcaaaa
agtgggacaaatgtgtcacctgtcacagaggatgaaatcaggagtgttcttcttgctgtg
gctccagtaaccacacaagatctagtatccagattcaagtctaggcttcgaggtccagag
gacaagaatgcttttgctgaaattctgaagaaaatctcgaagatacagaagacgaatggc
cacaactacgtcgtccttagagatgataagaagtga
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