Setaria italica (foxtail millet): 101765417
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Entry
101765417 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101765417
Membrane trafficking [BR:
sita04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
101765417
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_C
TRAPPC9-Trs120
SNAP
Motif
Other DBs
NCBI-GeneID:
101765417
NCBI-ProteinID:
XP_022679143
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All DBs
Position
IX:complement(3665628..3679490)
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AA seq
1349 aa
AA seq
DB search
MNGLCLTQYGQSSSSLPGALLDQITTTVHHRHRHRSRSPEIILFSGDHATPTPEKGFGLM
DPLRSYLGRLLLEEITPVVMVLTTPLAEAACRKSGLSFVDMLAPFSLFKKIDVPVRTASE
VPYRLQMFKIRMVYASDVRKEDYEVADERIKPVVSEANEKXLFRICFQTRRSLKMYLEVS
IYYIISEPEAELCPLWIKKFNRELMQTLSYSEHETFDHPVACLLVVSSMDKEPISKFVDL
FNTNQLPSLLNEGIMDPQILKHYLVLHDQQEGPQDIAVNVLAEMRSTLGLNDCKLLCINS
STEADGSNTDNSWLPYKALGLNNREGTCLLSMDDLMRSFMIKDFMQDFASNHIIPYMEQK
IRVLNQQVATTRKGFRNQIKNLWWRKRDDVPEAPNGPMYTFTSIESQIRVLGDFAFMLRD
YELALSNYKLLATDYKLDKAWKRFAGVQEMSGLCYFMLDQSRKDAEYCMENAFSTYLRIG
SSGQRNATRCGLWWAEMLKTRGQYREASSVYFRVSNEEPSLHSAVLLEQAASCYLLSSPP
MLRKYGFHLILAGNSYYMSDQKQHAVRVYRNALFVYKQNPWSYINDHVHFNVGRWYGVLG
IIDVAIKHLLEVIACSHQSLVTQNMFLNDFFHYVQSMGKKFDVYKLQLPVFNMSSLRVIH
EDHRTYASDADVGVSESTWHELEEELIPSSSVVRTNWLDTQPKSSRKYKDSSVCVAGEAV
KVSVELKNPLQIPVDVSGISLICQHSTNLDALTSDVSGLTLDGGEDKVNTEPSVSVFETD
EENFVVSKLDIILGGGESKRVQLDVTPKVEGILKLVGIWWTLSNSVVGYQYFEFDAQKKN
KKGKRGHRRSLNSSLVVIKGLPKLTGSIDRMPTKAFAGDLQLLKLNLRNHSEYAVKGIKM
KISNPRFLIPGDSSDIGLKFPHCLKKHTQSEINLVPYKSTKENFKGLLFAFPQDIEIQAG
ATLSWPIWFHAATPGNVSLYISIYYEMESSSDIKYRTLCMHYNLEVLPSLDISFAISMSS
SRLQEYIVRMDVRNKTPSESFVLHQLSCVGSKWAVSALPSCSSISSVETVSANQAVSCFF
KIKDFEADSCKEADRGSYRTDMTLYPGSSGDVFDIARSPLADFHFQERYRQGKLVKGPCS
LLDFVVISKAAGNSSEPSPDLQLLSHHTCHCSALSQSPVWWIMEGPRTITHDFSKSYCEV
SIQLVIHNSAAHPSSVRVVTSDVMPEKSQTVHPHDPSSVQGGWYDVSLENDIKAISSAKG
TQHEKQSSKSISPYVWCSLSSAQIELQPDSCARVPLKVCIFAPGTYNFSNYELQWKVHPS
EGAQVDESKNGSSGSGQGHPFYVTVLQSV
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggctttgtctaacccagtacggccagtcgtcgtcttctctacctggcgctctc
ctagatcagatcaccaccaccgtccaccaccgccaccgccaccgctctcggtcgccggag
atcatcctcttctccggcgaccacgccacgccgaccccagagaagggttttggcctgatg
gatccgctccggagctacctggggcgactcctcctcgaggagatcaccccggtggtgatg
gtgctgacaacaccgctcgccgaggcggcctgccgaaagagcggcctcagcttcgtcgac
atgctcgccccgttctcgctcttcaaaaaaatcgacgtgcccgtgcgaacggcgagcgag
gtgccgtacaggctgcagatgtttaagattcgcatggtttacgcgtccgacgtccggaag
gaggactatgaggtggctgacgagaggattaagccggtggtttctgaggccaatgagaag
nngctcttccggatttgctttcagacccgccgcagcttgaagatgtacttggaagtgagc
atttattatataatttcagagcctgaagctgagctgtgcccattgtggataaagaagttc
aatagagagctaatgcaaacgttatcctattcggagcatgagacgtttgaccatcccgtg
gcatgtcttctggttgtgtcgtcaatggataaagaacccatcagcaaatttgttgatctc
ttcaacacaaatcagttgccttctcttttaaatgaaggcataatggatcctcaaattttg
aagcattatctcgtacttcatgaccaacaagaggggccgcaagacatagctgtgaatgtc
ttagctgaaatgaggagcacccttggtttgaacgactgtaaattattatgtataaattca
tctacagaagcagatggtagtaatactgacaactcatggctaccttataaagctcttggt
ttgaacaatcgtgaaggaacctgtttgcttagcatggatgatttgatgagaagtttcatg
ataaaggacttcatgcaagattttgcttctaatcatatcatcccctacatggagcaaaag
atacgtgtcctcaatcagcaggtagccacaacaagaaagggttttaggaatcagatcaag
aacttgtggtggagaaagagagatgatgtcccagaagctccaaatgggccaatgtatacg
ttcacctccatagaatcacagatcagagttctgggtgatttcgccttcatgttacgagac
tacgagcttgctttgtcaaattacaaattacttgctacagattataagctcgataaggct
tggaagcgatttgctggtgtgcaggagatgagtggactctgctatttcatgttggatcag
tcaaggaaggacgccgaatattgcatggaaaatgccttcagtacatatctgagaattgga
tcgtccgggcagaggaatgccactagatgtggcctttggtgggcagaaatgcttaaaaca
agaggacaatatagggaggcatcaagtgtgtatttccgtgtttctaatgaggaaccttct
ttgcattctgctgtactgcttgagcaagccgcttcttgctatctattatcaagtccacct
atgcttcggaagtacggatttcacctaatcttagctgggaatagctactacatgtctgat
cagaaacaacatgctgttcgggtgtacagaaatgctctgttcgtttacaaacaaaaccct
tggagttacatcaatgatcatgtacattttaatgttggaaggtggtatggagttcttggg
ataattgatgtagccattaagcacttgctggaggtcatcgcttgtagccatcagtcgctg
gttacacaaaacatgttcctcaatgattttttccattatgttcagagcatggggaagaag
tttgatgtatacaagcttcaacttcctgtttttaacatgtcatcgctcagagtgatacat
gaagatcatcgcacttatgcatcagatgcagatgttggcgttagtgaaagcacttggcat
gagctggaggaagaattgatcccatcatcatcagtagtcagaacaaactggctggatact
cagcctaaatcttcaagaaaatacaaggattccagtgtttgtgtggctggagaagcagta
aaagtgagcgttgagcttaagaatcctctgcaaattcctgttgatgtttctggcatctct
cttatatgccaacattcgaccaatttggatgctttaacttctgatgtaagtgggttgacc
ttggatggtggtgaagataaggttaacacagagccatctgtttcagtatttgagaccgat
gaagaaaatttcgtagtgtcaaagcttgacattatattaggaggtggtgaaagtaaaaga
gtgcaacttgatgttactccaaaagttgaaggtattctgaagttggttgggatatggtgg
acactttcaaattccgtagtaggatatcaatacttcgaatttgatgctcaaaagaaaaac
aagaaagggaaaagaggccatcgtcgttctttgaacagcagcttggttgtaatcaagggt
ttaccaaaacttacaggatctattgatcgcatgccgacaaaagcatttgctggtgattta
cagctgctcaaattaaatctgagaaaccattcagaatatgctgtgaagggcataaaaatg
aaaatcagcaacccaagatttttaattcctggtgattcatcggacattggcctcaagttc
ccgcactgcttaaaaaagcacacgcaatcagaaatcaatcttgtaccatacaaaagcacg
aaggaaaatttcaagggtttactctttgcatttcctcaggatattgaaattcaagcaggt
gcaacactctcgtggcctatttggtttcatgctgcaactcccggaaatgtttctctttat
atatctatatattatgaaatggagagttccagtgatattaaataccgcacactgtgcatg
cattacaatcttgaggtcttgccatcacttgacatatcctttgctataagtatgtcctca
tcaagattacaagagtatatagttcgcatggatgtcaggaacaagaccccatcagagtca
tttgtacttcatcagttgtcatgtgttggcagtaaatgggcagtttcagcattgccttcg
tgcagttctatcagctctgttgaaacagtatcagcaaatcaggccgtgtcatgcttcttc
aagattaaggattttgaggctgattcatgtaaagaggcggacaggggttcctacagaact
gatatgactttatatcctgggagcagcggagatgtgtttgacattgctcgatctccttta
gctgattttcactttcaagaaagatataggcaaggcaagttagtaaaggggccatgcagc
cttcttgattttgttgtgatctcaaaggcagctggtaactcttccgagccttctccagac
ttgcaactactttctcatcacacatgtcattgcagtgcccttagccagagccctgtatgg
tggattatggaaggacctcgaacaattactcatgatttttcgaagtcttactgtgaggtt
agcatccagttggtaattcacaattcagcagcacatccgagttcggtgagagtggttact
tctgatgtcatgccagagaaaagccaaactgtccatccacatgatccttccagtgttcag
ggtggatggtatgatgtctcattggaaaatgacatcaaggcgatctctagtgccaagggt
acacaacatgagaagcaatcttcaaaaagcatttcaccatatgtttggtgttcattgagt
tctgctcaaattgagctccaaccagatagctgtgctagagttcctctaaaagtatgcata
tttgcaccaggcacatacaatttttccaattatgagctgcaatggaaagtgcatccatct
gagggagcacaagtggatgaaagtaaaaatgggtcatccggtagcggtcaaggacatcct
ttttatgttactgttcttcaaagtgtctag
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integrated database retrieval system
