Setaria italica (foxtail millet): 101765455
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Entry
101765455 CDS
T02818
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH15 chloroplastic
KO
K26077
ATP-dependent RNA helicase ISE2 [EC:
5.6.2.6
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101765455
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
101765455
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
101765455
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH3_ISE2
DSHCT
DEAD
ResIII
DEXQc_Suv3
Helicase_C
IstB_IS21
AAA_22
Ski2_cyano_M
GlpR
Motif
Other DBs
NCBI-GeneID:
101765455
NCBI-ProteinID:
XP_004953907
UniProt:
K3YPE5
LinkDB
All DBs
Position
I:37543464..37551544
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AA seq
1174 aa
AA seq
DB search
MHCLAPHFLLPLPTASRHALPQTQTPPLPLLLLPSRASRLLHLASARSPSRAAASVSDDD
EDEDEEVDVDDDDDEIGIRDADDEDYDEYEDGDEGDEEVVDEESVGEDDEEAEDEDGERE
DTSVRRRESEEYKSRRVAKLVAEVREFGEDIIDYNELAGIYDFPIDKFQRLAIQAFLRGS
SVVVSAPTSSGKTLIAEAAAVATVARGRRLFYTTPLKALSNQKFRDFRNTFGDHNVGLLT
GDSAINKDAQILIMTTEILRNMLYQSVGMTASEGRLFQVDVIVLDEVHYLSDISRGTVWE
ETVIYCPKEVQLICLSATVANPDELAGWISQIHGKTELVTSNKRPVPLTWHFSKKYALQP
LLDGKGKKMNRKLRMSNFQNLASPKNDFYYVKGKRRLRANKNEQGNRSPLDISKQVQLSK
HELSNMRRSQVPLIRDTLSQLWESDMLPAIWFIFSRRGCDAAVEYLEDCRLLHDCEASEV
ELELRRFKMQYPDAVRESAVKGLLRGVAAHHAGCLPLWKSFIEELFQRGLVKVVFATETL
AAGINMPARTAVISSLSKRIDAGRQLLTPNELFQMAGRAGRRGIDTVGHAVLVQTPYEGP
EECCDIIFAGLEPLVSQFTASYGMVLNLLAGSKVTHNQKESDDLKVKRSGRTLEEARKLV
EQSFGNYVGSNVMVAAKEEIERIQQEIQYLSSEITDESIDRKCREELSEEDYAEISLLQK
RLKEEKQIRNELKKRMELERMAAWKNRLEEFESGHLPFMCLQYKDKDSVHHTIPAVFIGN
LNSFADQKIANMVEEDSLGSGKHKADTGEQLYCPSYYVALSSDNSWYLFTEKWIKTVYKT
GLPAVPSVEGGTLPRETLKQLLLREEMMWDKLAKSEYGSLLSMDGSLDTWSWSLNVPVLN
SLSEDDEVERFSQEHQDAVECYKQQRRKVSHLKKTIKSTKGFKEFQKIIDMRNFTKEKIE
RLEARSRRLTRRIKQIEPTGWKEFLQISKVIQEARALDINTQVIYPLGETAAAIRGENEL
WLAMVLRNKVLLDLKPSQLAAVCGSLVSEGIKLRPWKNSSYVYEPSSVATGVISYLEEQR
NSLIDLQEKHNVKIPCEIDAQFAGMVEAWASGLTWREIMMDSAMDDGDLARLLRRTIDLL
AQIPKLPDIDPVLQKNAQIACSVMDRVPISELAG
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcctcgccccccatttcctcctcccactccccaccgcctcgcgccacgcgctc
cctcaaacccaaaccccaccccttcctctcctcctcctcccctcccgcgcctctcgactg
ctccacctcgcctcagcgcgctcgccgtcccgcgccgccgcctcggtctccgacgacgac
gaggatgaggatgaggaggtcgacgtggacgacgacgacgacgagataggcatccgcgac
gcggacgacgaagactacgatgagtacgaggacggggatgagggcgatgaggaggtggtg
gacgaggagagcgtcggtgaggacgacgaagaggcggaagacgaggatggcgagcgggag
gatacctcggtgcggaggcgggagtccgaggagtacaagtcccggcgggtggcgaagctt
gtcgccgaggtgcgggagttcggggaggacatcatcgactacaatgagctcgcagggatc
tacgacttccccatcgacaagtttcagcgcttggcgatccaagcatttttaagaggttca
tctgtcgtagtttctgcacctacaagtagtgggaagacattaatagcagaagctgcagcg
gtcgcaacagttgctagaggaagacgtctcttctacacaacaccattaaaggccttgtca
aatcagaagtttcgtgatttccggaatacctttggtgatcataatgttggtcttcttaca
ggagattctgctatcaacaaagatgcccagatcctaattatgacgacagagattttgcgt
aacatgctgtaccaaagtgttggcatgacagcatcagaaggtagattatttcaagttgat
gtcattgttttggatgaagttcattatttgagtgatatctcacgcggcactgtttgggaa
gaaactgtcatatattgtccaaaggaagtccagcttatatgcttgtcagccactgttgca
aatcctgatgaattagctggctggataagtcagattcatggtaagacagagcttgtaaca
tcaaacaaacgtccggttccacttacttggcacttctcaaagaaatacgccctacagcca
cttcttgatggaaaagggaagaaaatgaataggaaactgcgaatgtctaactttcagaac
ttagcatctccaaagaatgacttctattatgtgaaaggaaagaggagacttagagcaaat
aaaaatgagcaaggtaatagaagccctttggacatatcaaaacaggttcagttgtcaaag
catgaactcagtaatatgcgccgctcccaagttccactaatacgcgacactttatcacaa
ctttgggaaagtgacatgcttccagctatttggtttatttttagtagaagggggtgtgat
gcagctgttgaatatcttgaggattgcagattgttgcatgactgtgaagctagtgaggtt
gaactggaactcaggagattcaagatgcaatatcctgatgctgtccgagaaagtgctgtg
aaaggactcttgcgaggggttgctgctcatcatgctggttgcttgccactgtggaaatca
ttcattgaagaattatttcagcgtggccttgttaaagtagtttttgcaacggaaaccctt
gcagcggggattaacatgcctgctaggacagctgtgatttcttctctcagcaaaagaata
gatgccgggcgccagctcctaacgcctaatgaactattccagatggcaggtcgtgctgga
aggagagggatcgatacagttgggcatgctgttcttgttcagactccatatgaagggcct
gaagagtgttgtgacattatctttgctggacttgagccacttgtctcacaattcactgca
tcatatgggatggttttgaacctccttgccggttcaaaagttacccataatcagaaagaa
tcagatgatctgaaggtcaagcgctctggaagaactttagaagaagctcgaaagctagtg
gagcaaagctttgggaattatgttgggagcaatgtaatggttgctgccaaagaagagatt
gaaagaatacagcaagaaatacaatacctctcttcagaaattaccgatgaatctattgac
cgaaaatgcagagaagaattatcagaggaagattatgctgagatttcccttctacaaaag
agactgaaggaagagaagcagatcagaaatgagctgaaaaaaaggatggaactggagaga
atggctgcatggaaaaatcggttggaagaatttgaaagtggccatcttcctttcatgtgc
ctgcaatataaagataaggattcagttcaccacactatccctgctgtatttattggaaac
ctcaactcgtttgctgatcaaaagattgcgaacatggtggaagaagattcacttggttca
ggcaagcataaagctgatactggggaacaactttattgcccatcttactacgtagcttta
agttcagataattcatggtatctgttcacagaaaaatggataaaaactgtttacaagaca
ggtcttcctgctgtcccttcggttgaagggggcacactccctagagaaaccctgaaacag
ctccttttgcgtgaagagatgatgtgggataaacttgcgaaatcagaatatggttctttg
ttaagcatggatggttctctagacacatggtcgtggagtctcaatgttcctgtgcttaat
agcctttcggaagacgatgaggtagaacgattctcccaggaacatcaagatgcagtagaa
tgctacaagcaacagaggaggaaggtttcacatttgaagaaaacaatcaagagtactaag
ggtttcaaagaattccaaaagatcattgacatgagaaactttacaaaagaaaagattgag
cgcttggaagctagatccagacgcttgactcgacggataaaacaaattgaaccaaccggt
tggaaagaatttctccagatcagcaaagtcatacaagaggctagagcgttagatatcaat
actcaggtaatctatcctttgggtgagaccgcagcggctatacgaggagaaaatgagctc
tggcttgctatggttcttaggaacaaggtcctcttggatctaaagccatctcaattggca
gcagtttgtggaagtttagtgtcagaagggatcaaacttcgtccttggaaaaacagcagt
tatgtatatgaaccttcttctgttgctactggtgttataagctatttagaagagcagaga
aactcgctcatcgacctccaggagaaacataatgttaagataccctgcgaaatagatgct
cagtttgctgggatggttgaagcctgggcttcagggttgacctggagggagataatgatg
gactctgcaatggatgatggagatttagcccgtctactcaggcgcacaatcgatttacta
gctcagattccgaaattaccagacatcgatccggttctccaaaagaatgcacaaattgct
tgcagcgtcatggaccgagtacccattagcgagcttgccggttga
DBGET
integrated database retrieval system
