Setaria italica (foxtail millet): 101765576
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Entry
101765576 CDS
T02818
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101765576
03015 mRNA surveillance pathway
101765576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101765576
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101765576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101765576
NCBI-ProteinID:
XP_004971329
UniProt:
K3XI23
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All DBs
Position
V:46748354..46752647
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AA seq
427 aa
AA seq
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MAKPRRGRSASRSSSGSSSRSPSRSVSSGSVSSRSRSRSRSFSSSSSQSRSRSPPPAKRS
SPGARKGRSPSPPPKRGSPSKKVRSPSPPPKKASSPRKASPPAESTVICIDHLSRNVNEA
HLKEIFGNFGEVVNVELSMDRLVNLPRGYGYVEFKKRADAEKALLYMDGGQIDGNVVKLR
FTLQPRQRAASPMKVPPPPPKRDAPQTDKGAGSAEKDAQQRPRESSPRKKPASPPRKRSP
PNRRVESPRRPPDPSPRRRPDSPPIRRRPDPSPVRRGDTPPRRRPLSPLRRRSPSPPRRH
RSPMRPSPRRGRGSPSPRRRSPGPLRRRSPPPRRLRSPPRRPPPPRRYSRSPPRRPLRSR
SRSISPRRGRGPPLRRGRSDSSYSRSPSPPRKGPRRVSRSRSPRRPPRGRSISSDSRSSS
SPSPRRR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcggcgcggccgctccgcgtcgcgctcctcctcgggctcctcctcccgc
tcgccgtcccgctccgtctcctcgggctccgtctcgtctcgctcccggtcgcgctcccgc
tccttctcgtcgtcgtcctcccagtcccggagccgctcccctcccccggctaagcgcagc
tcacctggagcacggaaaggtcgatcaccttcaccacctcctaaaagaggttcaccctca
aagaaagtccgttcgccatcaccaccacctaaaaaggcttcatcccctaggaaagcgtct
cctcctgctgagtccactgttatctgcattgaccatttatcaaggaatgttaatgaggct
cacttgaaagagatatttggaaattttggcgaagtggtgaatgtggagctatcaatggac
cgattggtaaatcttcctcgtgggtatggatatgttgaattcaagaagagagctgatgct
gagaaggctcttctttacatggatggtggtcaaattgatgggaatgttgttaagttgaga
ttcactcttcaaccacgccaaagggctgcatcacctatgaaggtgcctccccctcctcca
aaaagagatgctcctcagactgacaagggtgctggcagtgctgaaaaggatgctcagcag
cgtcctagggaatcatctccacggaagaagcctgcttcacctccacggaagcgatctccc
ccaaatcgaagggttgagtcacccaggcgcccacctgacccatctcctaggcgtcgtcct
gattctccacctatccgtcgccgaccagatccttctcctgtcaggcgtggtgacacacct
cctcgcaggagaccactgtctccccttaggaggcgttctccctctccacccagaaggcat
aggtcaccgatgcgtccttcacctaggaggggtcgtggcagcccatcgccacgcaggcgc
tcccctggacctcttaggcggcgctcaccaccaccaaggcggttgaggagcccaccaaga
aggccaccacctccacgtcgttatagtcgttctcctcctcgccgaccccttcgctcccgc
tccagatcgatttctccaagaaggggtcgagggcctccattgaggcgtggaaggtcagac
tcatcatattctcgatcgcctagtccaccaagaaaggggccaagaagggtatcaaggagt
cgtagccctaggaggcctcctagaggaagaagcatctctagtgacagccgaagcagcagc
tcaccatcccctagacgcaggtag
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