Setaria italica (foxtail millet): 101765756
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Entry
101765756 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear poly(A) polymerase 3
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101765756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101765756
Enzymes [BR:
sita01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
101765756
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
101765756
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
MTPAP-like_central
NTP_transf_2
PAP_RNA-bind
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
101765756
NCBI-ProteinID:
XP_014660133
LinkDB
All DBs
Position
II:complement(48767336..48772497)
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AA seq
531 aa
AA seq
DB search
MAAVAPVPWWPSPALPPAGLLAVTAPPGNPEPQTLPFLLPPPPPPPAGYPLLPPRGPIVL
QLHPHPIFLAEVDRRRSCSLVQLLKDEGAVPSPEDEKRREKVIRELKKIVMHWAKAVARE
QSVPQRLATATVLTYGSYTLGAHGPESDIDALCVGPCIATLQYHFFVVLRQILEGRPEVS
GVQTVESAKVPLMRFRFTGIAVDLTYAQLPVIDASKAINTFSPLLLQKIDERSWRSLSGV
RVNEQIVQLVPNAEKFQALLRCLKLWARKRGLHCHHLGFFAGIHLAILGAYICRRYPNAS
VNGLFIVFFQTFAHWPWQVPVSLHDEETNCLHSEGRLMPIVMPCTPPEFCVSNVTRSTFK
KIREELTRGYALTKDPLRHGFEWTWLFESFPYAEKHHQFLRIALCAPTFAELRDWAGWVK
SRFRFLILKLERVGIECDPCPSEEIDHTVKEPNMVFYWGLIPEKIIHVDTSSLKDDFMKD
ITNDVYGKVKCTRSDVTISVVGLSQLPKSMCSHSVHXAIHAALHAGLPGHK
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtcgcgcccgtcccctggtggccttccccggcactgccgcctgcgggcctc
ctcgccgtgaccgcaccccccggcaacccggagccccaaaccctaccgttcttgctccca
ccgcccccgccgccgcctgcgggctaccctctccttcctccgcggggcccgatcgtcctc
cagctccacccccaccccatcttcctcgccgaggtggatcgccgccgcagctgttccctc
gtgcagctcttgaaggatgagggggccgtcccgtcgccagaggatgagaagaggagggag
aaggtgatccgagagctcaagaagatagtgatgcattgggccaaggcggtggcgcgtgag
cagagtgtgccccagaggctagctacggccacggtcctgacatacggttcctacacatta
ggggctcatggacctgaatctgacattgacgcactttgtgttgggccttgtattgcaaca
ctgcagtaccatttctttgttgttctgagacaaattcttgagggcagaccagaagtatcg
ggagtgcaaactgttgagagtgctaaggttccgctgatgcgatttagattcactgggatt
gcagttgatctcacatatgctcagcttcctgttattgatgcatcaaaggctataaataca
tttagccctctgttactacagaaaattgatgaacgaagctggaggagtctatctggagtt
cgtgttaatgaacaaattgttcagctagtaccaaatgctgagaagtttcaagctttgttg
cgatgcctcaaactatgggctaggaagagaggacttcattgtcatcatcttggcttcttt
gctgggattcatttagcgatccttggagcttatatctgtcggagatatccaaatgccagt
gtcaatggtttgttcatagtgttctttcagacttttgctcactggccctggcaagttcca
gtaagtctgcatgatgaggaaactaattgcctgcattcagaggggcgtctcatgcccata
gtgatgccctgtaccccgccagagttttgtgtgtccaatgtgacaaggagcaccttcaag
aaaataagagaggaacttacacgtggttatgctttgaccaaggatccattgaggcatggt
tttgagtggacttggctttttgaatcctttccctatgctgagaaacatcatcaatttctt
cgcattgctttatgtgcgccaacattcgcagagctgcgtgactgggctggatgggtgaaa
tctcgcttccgtttcctgattctgaagttggaaagggttggcattgagtgtgacccatgc
ccctcagaggagattgatcatacagtcaaggagccaaacatggtcttctactggggcctc
atccctgaaaaaatcattcatgtggacactagctctctgaaagatgatttcatgaaagat
atcaccaatgatgtctacggcaaggtgaaatgcacacgttcagatgtgacaatatctgtg
gttggtctgtcacagctgccaaagagtatgtgcagccattctgttcacntggcaatacat
gcagcattgcatgctgggctaccaggccacaagtga
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