Setaria italica (foxtail millet): 101765944
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Entry
101765944 CDS
T02818
Name
(RefSeq) TATA-box-binding protein 1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101765944
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sita03000
]
101765944
03021 Transcription machinery [BR:
sita03021
]
101765944
Transcription factors [BR:
sita03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
101765944
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101765944
RNA polymerase III system
TFIIIB
101765944
RNA polymerase I system
SL1/TIF-1B
101765944
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
101765944
NCBI-ProteinID:
XP_004983052
UniProt:
K4AER8
LinkDB
All DBs
Position
IX:19127979..19130509
Genome browser
AA seq
195 aa
AA seq
DB search
MDGARPVDLARHPSGIVPALQNIVSTVNLDCQLDLKMIALQARNAEYNPKRFAAVIMRIR
EPKTTALVFASGKMVCTGAKSEEHSKLAARKYARIIQKLGYPAKFKDFKIQNMVGSCDVK
FPIRLEGLAYSHGAFSNYEPELFPGLIYRMKHPKIVLLIFVSGKIVLTGAKVREEIYAAF
ENIYPVLTEYRKCQK
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggacggggcgcggccggtggacctcgccaggcacccgtccggcatcgtccccgccctc
cagaacattgtctcaacagtcaatttggactgtcagttggatctgaaaatgattgctcta
caagctcgtaatgcagaatacaatccaaagcgttttgctgcagttatcatgaggataagg
gagccgaagacaactgctctggtgtttgcttcagggaagatggtttgcaccggagcaaag
agcgaagaacattcaaagcttgctgcaaggaagtatgcacgaatcatccagaagcttggg
tatccagccaagttcaaggatttcaagatccagaatatggttggctcttgtgacgtgaaa
tttccaattcgtttggagggcttggcttattctcatggtgccttttctaattatgagccc
gagctctttcctgggctgatttaccgtatgaagcaccccaagattgtgctcctcattttt
gtctctggaaagattgttctcactggagccaaggtgcgcgaagagatatacgccgccttt
gagaatatctaccctgtgctaactgaatacaggaaatgtcagaaatga
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