Setaria italica (foxtail millet): 101766087
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Entry
101766087 CDS
T02818
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101766087
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
101766087
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
101766087
NCBI-ProteinID:
XP_004984222
UniProt:
K4A977
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All DBs
Position
IX:complement(44302920..44308256)
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AA seq
483 aa
AA seq
DB search
MSSSGGGGGQQFRYAQTPSKVLHLRNLPWECAEEELVELCKPFGRIVNTKSGVGANRNQA
FVEFTDVNQAISMVSYFASSSEPAQIRGKTVYIQYSNRQEIINNKSPGETAGNVLLVTIE
GVQASDVTIDVIHMVFSAFGYVHKIATFEKAAGFQALIQYSDAATASAAREALDGRSIPS
YLLPEHVTSCCLRISFSAHKDLNIKFQSNRSRDYNNPYLPINYSAMDGTLQPAVGADGRK
VEAQGNVLLASIENMQYAVTVDVLHTVFSAFGTVQKIAIFEKNGGTQALIQYPDVTTAAV
AKEALEGHCIYDGGYCKLHLSYSRHTDLNVKAHGDKSRDYTIPPGVIQGVPQPPGAAATS
TGWQGNIQGAGAYAPPGIPAQNHSANGQVPNWNSGNSGYPPAPGAYPGQMYSSPAQYSAS
GGFPNAPPAAPPQYAASGGFPTPPAAPPHELHASQQMPPQHGIQSGPAGVPGTSQPPPPS
YYH
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgggcgggggcgggggccagcagttccgctacgcgcagacgccgtctaag
gtgcttcacctgcggaacctgccgtgggagtgcgccgaggaggagctcgtcgagctctgc
aagcccttcggccgcatcgtcaacaccaagagcggcgtcggcgccaaccgcaaccaggcc
ttcgtcgagttcactgacgttaatcaggcaatctcgatggtttcttactttgcatcatca
tcagaaccagcacaaatccgtggcaaaactgtttacattcagtattcaaataggcaagaa
ataattaacaacaagagccctggagagactgctggaaatgtgttgcttgttaccatagag
ggtgttcaagctagtgatgtcaccattgatgtgatccatatggttttctcagcatttgga
tatgttcacaaaatagccacctttgaaaaggctgcaggttttcaggcattgatccagtac
agtgatgcagccactgcttcagctgctagagaagccttagacggaaggagcatcccaagt
tacttgcttccagagcacgtaacgtcctgctgcttgcgaatttctttctctgcacacaag
gatttgaacatcaagttccagtcaaaccgcagcagggattataacaatccatatcttcca
attaactattctgccatggatggtacattacagcctgctgttggtgctgatggaaggaaa
gtggaggctcaaggcaatgttcttcttgcatcaattgagaatatgcaatatgctgttaca
gtagatgttcttcatactgttttctccgcatttggtacagtccaaaaaattgctattttt
gagaagaatgggggcacacaagctttgattcagtaccctgatgtaactacagctgcagtt
gcgaaggaagcattggaagggcactgcatctacgatggtggctactgtaagcttcacctg
tcatactctcgtcatactgatctgaatgtaaaggcacatggtgacaagagcagggattac
acaattccacctggtgtaatccaaggggtgccacaaccacccggtgcagcagctacatcc
actgggtggcaaggtaatattcaaggagccggggcatatgccccacccggtatccctgcc
caaaaccacagcgccaacggacaagtgccgaattggaattccggcaactcagggtatccc
ccagccccaggagcgtatccaggtcagatgtactcgtctccagctcagtactcagcatca
gggggctttcctaatgccccacccgctgctccgcctcagtatgcagcatcagggggcttc
ccgacccctcctgctgctccaccgcacgagttgcatgcttcgcagcagatgccgcctcag
catggaattcagtccggaccggcaggcgtgcctggaaccagccaaccaccaccaccatcg
tactaccattaa
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