Setaria italica (foxtail millet): 101766144
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Entry
101766144 CDS
T02818
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101766144
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sita01009
]
101766144
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101766144
Protein phosphatases and associated proteins [BR:
sita01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101766144
Spliceosome [BR:
sita03041
]
Common components
Common spliceosomal components
SR proteins
101766144
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
101766144
NCBI-ProteinID:
XP_004973345
UniProt:
K3YLP6
LinkDB
All DBs
Position
VI:23649817..23654502
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AA seq
283 aa
AA seq
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MSQAKEVRYTARSITPPAERNGTSSSPPPKRRSPSRSPPPKSTSRSPHPRSPKRRSTSRS
PPPRRRGRSRSRSRDRSRSRSLDDRNPGNNLYVTGLSTRVTEDDLEKFFSKEGKVKNCHV
VLDPRSKESRGFAFVTMDTVEDARRCIKYLHRTVLEGRLVTVEKAKRTRERTPTPGKYCG
RRGGSQRSPSPHRSRRRERSRSRDRKRERSRSRDRRERSRSRERRRERSRSRDRRERSRS
RDRRRERSRSRDRRKERSHSRDSQRRRGDRSRSLAGNGNHKTD
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagccaaggaagtgagatacaccgcacggtctattacacctcctgcagaaaga
aatggaacttcaagttcgcctcctccaaagaggcgcagcccttcaaggtcgcctccccca
aagagtacctcaaggtctccacatccaaggagtcctaagcggcggagcacttcaaggtct
cctcctcctaggagacgtggtagatcgaggtcaaggtcaagggataggagtcgatccagg
agcctagatgatagaaatccagggaataacctttatgtgactggattgtctactcgtgta
actgaagatgaccttgagaagttttttagtaaagaaggaaaggttaaaaactgtcatgtt
gttcttgatcctcgctcaaaagaatcccgtggctttgcctttgtgactatggatactgtt
gaagatgcaagacgctgcatcaagtacctgcaccgcactgtgcttgaaggtcgtctggtc
actgtagagaaggctaaaaggactcgagaaaggactcctactcctggaaaatactgcggt
cgaagaggaggatctcaaaggagcccatcacctcaccgttctcgcagaagggagcgatcc
cgctcaagggaccgtaaaagggagcgttctcgctcacgggatcggagggaacggtctcgc
tcaagggaacgcagaagggaaaggtcccgctcaagggatcgaagggaacggtctcgctca
cgggaccgccgaagggaacgctcacgctcacgggaccgcaggaaggaacgctcacactca
agggactctcagagaaggcgtggagatcggtccaggtcactggcaggcaatgggaaccac
aagacagactag
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