Setaria italica (foxtail millet): 101766449
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Entry
101766449 CDS
T02818
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101766449
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
101766449
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Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40
Beta-prop_CAF1B_HIR1
WD40_Prp19
WDR55
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_WDR19_1st
CAF1C_H4-bd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_SCAP
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
WDR90_beta-prop_4th
WD_LRWD1
Rrn6_beta-prop
Beta-prop_DCAF12
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
101766449
NCBI-ProteinID:
XP_022684311
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Position
VII:complement(34743262..34746851)
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AA seq
451 aa
AA seq
DB search
MGRTIKKAKKAKSKKTKKVEASSSSNPVVASGPAKVWQPGVDALEDGEELQFDPEAYNYL
RGFSIGWSCLSFDVVRDQLGLVRSEFPHTFYGVAGTQAEKAPWNYIGIFKLSNISGKKRE
PIPPSAVDGDTDVDSDSSSDEEDEEINEDTKPILHLKKVAHAGCVNRIRSMTQKPHICAT
WGDTGHVQVWDLSSFLNSLAESGAPAPKEDDIIHKHLPVKVFSGHKDEGYAIDWSPLVAG
RLVSGDCNKCIHLWEPTPTNWNVDPNPFVGHSASVEDLQWSPTEADIFASCSVDGTIAIW
DIRTGKKPRMSVKAHKTDVNVISWNRLASCMIASGCDDGSFSVRDLRSIQEDSLVAHFEY
HKKAITSIEWSPHEASSLAVTSEDHQLTIWDLSLERDAEEEAEFRAKMKEQANAPEDLPP
QLLFVHQGQRDLKELHWHPQIPSMIVSTAID
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgcaccatcaagaaggccaagaaggctaaatccaagaagaccaagaaagttgaa
gcttcatcgtcatctaatcctgtggttgcctctggtccggccaaggtctggcaaccgggt
gtagatgcactggaagatggggaggagctccagtttgatcctgaggcttacaattatctc
cgagggtttagcattggctggtcttgcttgagttttgatgttgtgcgcgatcaacttgga
ctcgtccgatcagagttcccccatacattctatggtgttgctggaacacaggctgagaag
gctccatggaattatattggcattttcaagctttctaacataagtgggaagaagcgggaa
cctataccaccttcagcagttgatggtgacactgatgtggatagtgacagcagcagcgat
gaagaagatgaagaaattaatgaggatacaaagcccatcttacatctaaaaaaagtggcc
catgcgggttgtgtaaatcggatacgctcaatgactcaaaaaccacatatatgtgctaca
tggggtgatactggtcatgttcaggtgtgggacttgagctccttccttaattctttagct
gagtcaggggcacctgcacccaaagaagatgacataatccacaaacacttacctgtgaaa
gtatttagtggccataaagatgagggatatgcaattgattggagtccgcttgttgctgga
agacttgtttccggtgactgcaataagtgcattcacctgtgggagccaactccaaccaac
tggaatgtagatccaaatccatttgttggacactctgcaagtgttgaagatcttcagtgg
agtcccacggaagccgacatatttgcctcttgttctgtggatggtacaatagcgatatgg
gatatacgtacagggaagaaacctcgtatgtctgtcaaggctcataaaaccgatgttaat
gttatctcatggaataggcttgctagctgcatgatagcttcagggtgtgatgatggcagt
ttctcagttcgtgatcttagatcaattcaggaggactcgttggtagcacattttgagtac
cacaagaaagcaattacatctatcgagtggagtccacatgaagcatcatcattagctgta
acatccgaagatcatcaactcacaatttgggacctttcattggaaagagatgcagaagag
gaagctgagttcagagcgaagatgaaagagcaggcaaatgcacctgaagatttaccccca
caacttctctttgttcatcagggccagagagatttgaaagaactgcattggcacccacag
ataccctcaatgatcgtatcaacagcaattgac
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