Setaria italica (foxtail millet): 101766547
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Entry
101766547 CDS
T02818
Name
(RefSeq) protein PAF1 homolog
KO
K15174
RNA polymerase II-associated factor 1
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101766547
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
101766547
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Paf1
Motif
Other DBs
NCBI-GeneID:
101766547
NCBI-ProteinID:
XP_004972802
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Position
VI:4541540..4548077
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AA seq
628 aa
AA seq
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MASYRPYPPPPQHPPPPPPQGGFPPQMNPFAPPPPQQAPYGRMPAPPYHAGPPPPPPPPG
PPPPHQPQFNFGPGPPQQPLPPQQMYYQPPPPPYGGNSNPPPPPPSVPPPPPSPPPVAPP
PPPPPPAQPPPAQAPPPRKEQQPKAALPRAETEEERRARKKREFEKQRVEDRKQQQMMRE
SQATVLQKTQQTRPAHQQPSQSRHHHPPGGSRAVATGSRPASAPNAERFENRLKKPTTFL
CKHKFRNELPDPSAQLKWLPLNRDKDRYTKYRITSLEKNYMPKMIVPEDLGIPLDLLDMS
VYNPPAVQQPLAPEDEELLRDDEVLTPIKQEGIRKKERPTDKGVSWLVKTQYISPLSTDA
AKTSLTEKQAKEIRESRMGRNAFLDNLNDREKQIKAIEESFRTAKSRPVHQTKRGMQVEW
VMPLLPDFDRYDDPFVMANFDGDPTADSEQYNKLERTARDECESRAVMKSFSVNGSDPTK
QEKFLAYMAPAPHELARDLDDEDDIQYSWLREYHWDVRGDDKDDPTTYLVTFDEEEGARY
LPLPTKLVLQKKKAKEGRSGDEIEHFPVPSRITVSRTAHGGTMERGESSGMHENSKRRRS
PVDDDLDEHPKHSRGEDMEQYSGDEYSE
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtacaggccgtacccgccgccgccgcagcacccgccgcccccgccaccgcag
ggcggcttcccgccgcagatgaacccgttcgcgccgccgccgccgcagcaggcgccgtac
ggccggatgccggcgccgccttaccacgcggggccccccccgccgccgccgccacccggc
ccgccaccgccgcaccagccgcagttcaatttcggccccggccccccgcagcagccactg
cccccgcagcagatgtactaccagcccccgccgccgccctacggtgggaacagcaacccg
ccacctcctcccccttcggtgccacccccgcctccgtcccctccccctgtggctccgccc
ccgccccctccgcctccggcccagccgccgcctgcccaggccccgccgccccgaaaggag
cagcagcctaaggcagcgctgccgagggcagagaccgaggaggagcgtcgtgcgcgtaag
aagcgcgagttcgagaagcagcgggtggaggaccggaagcagcagcagatgatgcgcgag
tcgcaggccaccgttctacagaagacgcagcagacgcgccctgcgcatcagcagccatcg
cagagccgtcaccaccacccaccgggtggctctcgggcagtggcaactgggtctcgccca
gcatcagcgcccaatgctgagaggtttgagaatcggctcaaaaaaccaacaacgttcctg
tgcaagcacaagtttaggaatgagcttccagatccaagtgctcagctgaaatggctgccc
ctgaatagggataaggaccgatataccaaatacaggataacttcattggagaaaaattac
atgcctaaaatgattgtccctgaggatcttgggatacctctcgacctacttgacatgagt
gtatacaacccccctgctgttcagcagcctttggctcctgaagatgaagagctattgcga
gatgatgaggtcctcacccctattaaacaagaaggtataaggaaaaaggagaggcccact
gacaaaggtgtttcttggctggtcaagacacaatatatatctccactgagtactgatgca
gctaaaacgtcccttactgagaagcaagcaaaggaaatacgagaatcaaggatgggtcgc
aatgctttcctggacaaccttaatgatagagagaaacagatcaaagccatcgaagaatcc
ttcagaacagccaaatcacgacctgttcaccagactaaacgtgggatgcaagttgagtgg
gttatgcctctgctacctgattttgataggtacgatgatccgtttgttatggcgaatttt
gatggagatccgactgctgattctgagcagtacaacaagcttgagagaactgcacgagat
gaatgtgaatcccgggctgtgatgaaaagttttagtgtcaatggttcagaccctacaaaa
caagagaagtttttggcatacatggccccagcaccccatgagcttgccagagacttggat
gatgaagatgatatacagtattcttggctaagagaatatcactgggacgtaagaggagat
gataaagatgatcctacaacatacctcgtcacgtttgatgaggaggagggtgcaagatat
ttgcctcttcctactaagctagttttgcagaagaagaaagctaaggaggggagatctggg
gatgaaattgagcattttcctgtaccttcccgaattactgtgagcagaacagctcatggt
ggtaccatggagcgtggagaatcttctggcatgcatgagaattcgaagcgccgaagatct
cctgttgatgatgatcttgatgagcatccaaagcattctcggggagaagatatggagcaa
tatagtggagatgaatattctgagtga
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