Setaria italica (foxtail millet): 101766561
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Entry
101766561 CDS
T02818
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101766561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101766561
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101766561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101766561
NCBI-ProteinID:
XP_004955731
UniProt:
K3ZSZ4
LinkDB
All DBs
Position
II:complement(5915521..5921565)
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AA seq
471 aa
AA seq
DB search
MEAANYSGKLFVGGISWETDEDRLREYFGGFGEVTEAVIMRDRSTGRARGFGFVVFSDAS
VAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNVT
EADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV
KRAVPKEQSPGPVARSPAGAGQSYAMNRFLNGFNQGYNPNPIGGYGMRVDGRYGLLSGAR
NGFSSFGPGFGMGMNVEGGMSGTFGANSGFINSSNGRQMGSYYNGSSNRLGSPIGYLGLN
DDSGSMLSSMSRNVWGNGSLNYPSNPTNMNAFASPGNGGQVGITGDNWGGLPSAHAMGNI
SSLGSGNLGRGAGDNNFGLPSGSYGRSNSTGTIGEPFSASGNTYEVNNPDTYGSSSIYGG
TAWRFASSEVDIPSFGHDLGNIDPNIKSDVSASYMGNYTVNNNQPSRGITS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggccaactactccggaaagctcttcgtcggcggcatctcgtgggagacggac
gaggaccgcctccgcgagtacttcggcggcttcggggaggtcaccgaggccgtcatcatg
cgggaccgcagcacgggccgcgctcgtgggttcgggttcgtggtcttctccgatgcgtcg
gtggcggagcgggtgaccatggacaagcacatgatcgacgggcgcatggtggaggcaaag
aaggccgttcccagggacgaccacagtatcgtgagcaagagcaatgccagcagcataggg
tcacctggaccgggccgtactagaaagatctttgttggaggtttgccctcaaatgtcaca
gaggctgacttcagaaggtactttgagcaattcggtgtcataaccgatgtggttgtgatg
tatgaccacaacacgcagaggccgaggggctttggattcatcacctatgattcagaagat
gctgtggacaaagctctgcacaagagcttccatgagctgaatggtaaaatggttgaggtc
aagagggctgttccaaaagagcagtctcctggacctgttgcacgctcgcctgcgggagca
gggcagagctatgctatgaaccgcttcctgaatggcttcaaccagggttacaacccgaac
cccataggaggctatggcatgagggtggatggaaggtatggcctgctttcaggtgcacgg
aatgggttctcttcttttggcccaggttttgggatgggcatgaatgttgaaggtgggatg
agcggaacttttggtgcaaactcaggtttcatcaacagttccaatgggaggcaaatgggt
tcgtactacaatggaagttcgaacagattgggtagtcctattgggtaccttggcctcaat
gatgattcaggatcaatgttgagttcaatgtctaggaatgtttggggtaatgggagtcta
aactacccgagcaatcctacaaacatgaatgcttttgcttcacctggaaatggaggtcaa
gtcggtattactggtgacaattggggaggtctcccttctgctcatgcgatgggcaacatt
tcaagccttgggtcagggaaccttggccgtggagctggagataataactttggtttgcct
tctggcagctatgggaggagcaactcaactggtacaattggtgaacctttctctgcatca
ggcaatacatatgaagtgaacaaccctgatacatatggtagcagctctatttatggtggc
acagcctggaggtttgcatcatctgaggttgacataccttcttttggccatgatcttgga
aatattgatccaaatatcaaatcagacgtatcagcaagttacatgggcaactatactgtt
aacaacaatcagccaagcagaggtatcacttcctag
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