Setaria italica (foxtail millet): 101766757
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Entry
101766757 CDS
T02818
Name
(RefSeq) polygalacturonase ADPG1
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00040
Pentose and glucuronate interconversions
sita01100
Metabolic pathways
Module
sita_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101766757
Enzymes [BR:
sita01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
101766757
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
101766757
NCBI-ProteinID:
XP_004981341
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Position
IX:complement(2480661..2486154)
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AA seq
529 aa
AA seq
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MCQPNSPALLFFASNATTSTSPPGFHSSSSRALNRGYGRAPSLVTSIHQTNTKLSLPMAS
RLVLVFLAPLLALLFVSGALQAAAASTNGTASTEFSLDRAGGSVLAALPAVARLLARLLV
PGALEVEDGAAAGIWDTSSLLGSSVFSLDRYGARGDGRHDDTRALARAWRAACASRRPAV
VLVPRGRRYLLKVITLHGPCRSSVAVAVKGTLVASPNRDDWSEKERRHWIVFRRVDRLTV
DGGGAVDGNGETWWKHSCKINPDLPCKGAPTALSFHLCKNLRVEDLKIVNSQQIHVSVED
CTNVQLARLSITAPHSSPNTDGIHITRSKDVKVTNCKIRTGDDCVSIEDGTHNLHVSKVV
CGPGHGISIGSLGDHNSWAQVSGITIDTVQLYGTTNGARIKTYQGGSGYAKDITFQNMIM
HAVDNPIIIDQNYCDKATPCEEQRSAVEVSNVVFKNIRGTTMTKDAIKLNCSMSVPCHGI
TLQNIDLRMHSGMGNTVSTCQNAKWRKYGTVRPQPCTAKTYEILELSSI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgtgccaacctaactctcccgcgttactcttcttcgcaagcaacgcaaccacctcaacc
tcgcctccaggattccatagctccagctcccgcgcgttaaatagaggctatgggcgtgct
ccttccttggtcaccagcatccaccaaaccaacaccaagctctctctgcccatggcgtcg
cgtcttgtgctcgtgttcctggcgcccctcctcgcgctgctcttcgtctccggcgctcta
caggctgctgcagcctcgaccaatggcactgcctcgaccgagttcagcctcgaccgcgcc
ggcggcagcgtactcgcagctctgccagcggtggcgcggctcctcgcgcggctcctcgtg
cccggcgctctagaggtcgaagacggagccgccgccgggatctgggacacgtcatcgctg
ctgggctccagcgtgttcagcctcgaccgctacggcgcgcgcggcgacgggcggcacgac
gacacccgcgcgctggccagggcgtggcgggcggcgtgcgcctcgcgtcggccggccgtc
gtgctcgtcccccgcggcaggcgctacctgctcaaggtcatcaccctccacggcccctgc
aggtccagcgtcgcggtcgcggtgaagggcacgctggtggcgtcgccgaacagggacgac
tggagcgagaaggagaggaggcactggatcgtgttccggcgcgtcgacaggctcaccgtc
gacggcggcggcgccgtcgacggcaacggcgagacgtggtggaagcactcgtgcaagata
aacccggatctgccatgcaagggggctccgactgctttgtcgttccacttgtgcaagaat
ttgagggtggaggatctgaaaatcgtcaacagccaacaaatccacgtgtcggtcgaggac
tgcaccaatgtgcaactggcacgtctgtccatcactgctcctcactccagtcctaacact
gacggcatccacatcactcgcagcaaagatgtgaaggtcaccaactgcaagatcaggact
ggagacgattgcgtgtcaattgaggacgggactcacaatcttcatgtctcgaaagttgtg
tgcggaccgggccacgggatcagcatcggaagccttggagatcacaactcatgggctcaa
gtctctggcattaccatagacacggtgcagttatacggcacaaccaatggagcacgcatc
aagacataccagggaggaagtggttacgctaaggatatcacattccaaaacatgatcatg
cacgctgtcgacaacccgataatcatcgatcagaactactgcgacaaggctactccatgc
gaagaacagagatcggcagtggaggttagcaatgtggtcttcaagaacatcagagggaca
accatgaccaaggatgccattaagctgaactgcagcatgagcgtcccatgccatggcatt
accttgcagaacattgacctgagaatgcatagcggcatgggcaacacagtaagcacgtgc
cagaatgcaaaatggaggaaatatgggaccgtccgcccacagccctgcactgccaaaacc
tatgaaatattggaattgagcagcatttaa
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