Setaria italica (foxtail millet): 101767236
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Entry
101767236 CDS
T02818
Name
(RefSeq) probable E3 ubiquitin ligase SUD1 isoform X1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101767236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101767236
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101767236
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
101767236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
Motif
Other DBs
NCBI-GeneID:
101767236
NCBI-ProteinID:
XP_004972375
UniProt:
K3YG67
LinkDB
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Position
VI:complement(95305..99946)
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AA seq
882 aa
AA seq
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MADAAAAARLPPGEEEDACRICHLPGEADRPLRHPCACRGSIRFVHDDCLLRWLATRRGS
STASASSICEVCKRAISIAPVYAANAPARLPLPEFMLGLASKLMAWLLLLLSLLFAVCVW
EFLMPLTTLWVWRLALSRTFAQVRHLLSLRASAFARPYALRFMPSPDTVLACASIRRAFL
RELPNLRQLNAPARIAADALAPLALWVARVEAHLQRRFGGLDTLQLLALHTVEASLMVVV
GDVAFAFLLGFLPFSLGRIVLCCTSCFSFGTVDVARSYTSTAMVLLVGYGFILMVALLFT
GLHTFQQYSRGERPTITIYFGVLTDWVCWLSSPLRMLPSIHGMLDRTWSFLQQFFWGIVS
VANVSLNLAAILVICPLFFGWLLDICTSKLFGVKVPQKLQLLFASSFASTALHWLIGCVC
LKLHSSLSSLLHPVFRLGVRAPFVHTTGGQIKIGEPFCKFYFKILPGLFLSVIYVAMVIF
VPVEIAFHLAPTVFPLDITYFDPPTQGTVLWQAARNYAELLSGVLLLKFLLCNALKYLQP
GVLVQKVLWYLFATTGQVLGLSDLLIAQPDDSGQSEIGNSVIPKDQHGRTAEAKDKRRSA
AVHMVLLMVLAWLIVVIFNAALLVAPVSVGRALLFAIPQVPVAGALKSNDIFAFAVGFCI
LSTIIAASRDAFAYVMSGRTRLLASIVCNWGTTALKSSPLLFLWVVIIPFLIGLLVDYLL
ISPFGPPYNEVPVLDFFCTWFLGLQLLKFWTKLVRWTRVAPFLAYFIDERWDRKLSQARE
DGFSGLRAMWVLRDILMPMIVKLLSAVCVPYVLAKVVAPVLGYSAPVNSAVLRFAWLGSL
AMCVLCYIAKVLCRLVVRLHDSIRDERYLVGQRLQNYYTDNM
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgcggcggcggccgctcgtctcccgcccggcgaagaggaggacgcgtgccga
atctgccacctcccgggcgaggcggaccgccccctgcgccacccctgcgcctgccgcgga
agcatcaggttcgtccatgacgattgcctgctccgatggctcgccacgcgacgcggcagc
agcacggcgtcggcatcatccatatgcgaggtgtgcaagcgcgccatctccatcgccccc
gtctacgccgcaaacgctcccgccaggctgcccctccccgagttcatgctcggcctcgcc
agcaagctcatggcctggttgctcctactcctctccctcctcttcgccgtctgcgtctgg
gagttcctcatgccgctcaccaccctctgggtctggcgcctcgccctctccaggaccttc
gctcaagtgcgccacctcctctccctccgcgcctctgccttcgccaggccctacgccctg
aggttcatgccctcgccggacaccgtccttgcctgcgcctccatcaggagagccttcctc
agagagctccccaaccttaggcagctcaacgcccctgccaggatcgctgctgacgccctt
gctccccttgcgctttgggtggcccgcgtcgaagctcacctgcagcgccgctttggaggg
ttggataccttgcagctccttgcgctgcacaccgttgaagcttccctaatggtggtggta
ggtgatgtggcatttgcttttctgcttggatttctccccttctcactgggaagaatagta
ttatgctgcacgtcgtgtttcagttttggcactgtggatgtagcccgctcctacacttca
acagccatggtacttttagttggatatgggtttatccttatggtggcgcttctctttact
ggcttgcatactttccagcaatactcaaggggcgagcgccccaccatcaccatttacttt
ggcgtattaactgactgggtgtgctggctgtctagccctcttagaatgctgcctagcata
catgggatgctcgacaggacatggagtttcttgcagcaattcttctgggggatcgtaagt
gtagccaatgtttctcttaaccttgcagcgatacttgtgatatgcccattgttctttggc
tggttgcttgatatctgcacttcaaaattgtttggggtgaaagtacctcagaagctccaa
cttctatttgcttcatcatttgcttctactgcccttcactggcttattggatgcgtctgt
ttgaagctgcattcctcactttcaagtcttcttcacccggtgttcaggctaggagttagg
gccccttttgtccacactactggaggccaaatcaagataggggaaccattctgcaagttt
tatttcaagattctgccgggtctttttctcagcgttatctatgttgcaatggtcattttt
gtccctgttgaaattgcttttcatttggcacctactgtgttcccgttagacatcacctac
tttgatcctccaactcagggcacagtactttggcaagcagcacggaactatgcagagtta
ctatctggtgttcttcttctgaagtttctactttgcaatgcactgaaataccttcagcct
ggtgtgcttgtgcagaaggtactgtggtatttgtttgccactactggacaggttcttggt
ttgtccgatttattgattgctcagcctgatgactctggtcaatccgagattgggaatagt
gtcataccaaaagatcagcacggtaggactgctgaggctaaggacaaaaggagatctgct
gctgttcatatggtgctactcatggttctagcgtggcttattgttgtgatattcaatgct
gctctacttgttgctccagtctcagttggacgtgcattgttgtttgccatccctcaggtg
ccagtagcaggtgctttgaagtcaaatgatatttttgcatttgctgtcggattttgcatc
ttgtcaactattattgctgcctctagagatgcctttgcttacgtgatgtctgggcgaaca
cgccttctggcttctattgtctgcaattggggtacaactgctttgaagagttctccgctt
ttgttcctatgggttgtcatcattccctttctgatcggattgctggttgattatctgctg
atatcaccctttgggccaccctacaatgaagttccagttcttgatttcttctgcacctgg
ttcctggggttgcaattgctgaaattctggactaagttggttcgctggacaagggttgcc
cctttcctagcctatttcatcgatgaaaggtgggataggaagctaagtcaggcaagggag
gatgggttttcagggctcagggcaatgtgggtgctgcgagatattttgatgccaatgatc
gtgaagctcctgtctgctgtctgtgttccttatgtgctcgcaaaagtcgttgccccagta
cttggctactctgctcccgtgaactctgcagtgcttcgttttgcatggctagggagcctt
gccatgtgtgtgctctgttatatagccaaagtactctgcaggctcgtcgtcaggctccac
gattcgataagggatgagcgctatctcgtcgggcagaggttgcagaactactacactgac
aatatgtag
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