Setaria italica (foxtail millet): 101767266
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Entry
101767266 CDS
T02818
Name
(RefSeq) endoribonuclease Dicer homolog 4 isoform X1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sita03036
]
101767266
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
101767266
microRNA pathway
RISC loading complex
101767266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
DEAD
DND1_DSRM
ResIII
dsrm
PAZ
SWI2_SNF2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
101767266
NCBI-ProteinID:
XP_004976179
UniProt:
A0A368RWG9
LinkDB
All DBs
Position
VII:complement(24574446..24591014)
Genome browser
AA seq
1632 aa
AA seq
DB search
MGEGEDEASSSAAAASAAAGGPKDPRNIARKYQLDLCKRAVEENIIVYLGTGCGKTHIAV
LLMNELGHLIRKPSREVCVFLAPTIPLVRQQATVIADSTNFKVQCYHGSGKNLRDHQAWE
KEMAEYEVLVMIPQILLRNLRHCFIKMDSIVLLVFDECHHAQAQKRHPYAQIMKEFYNNV
DKPPRVFGMTASPIIGKGGSNKLTYTKCINSLEELLNAKVCSIDNVELESVVASPDIEVY
FYGPVGHSNLTATYSKGLDGYKLQSECMLRESLCNFKESQKKLKTLWRLHENLIFCLQEV
GLFGALQAARTFLSSGGGSLDRKGFDINDNHASFVQHYLHKAISLLSCDILDGADADSVD
LETLEEPLFSKKFAVLIDVLSRYRLEENMKCIVFVKRIIVARVISHILQNLKCLDFWKCE
CLVGCHSGLKNMSRNKMGSIIEKFSSGEVNLLVATSVGEEGLDIQTCCLVVRFDLPETVS
SFIQSRGRARMSKSKYIFLLERGNQSQEKLLGDYITGESIMDKEVNLRTSNDMFDSLEEN
IYRVNNTGASISTACSVSLLHCYCDNLPRDRFFFPSPSFFYVDDVEGIVCRLILPPNAAF
RQVNSQPCPSKDEAKRDACLKACIRLHELGALTDFLLPGQGSRKTKVSTTDILESNKAED
ESFREELHEMLVPAVLRSSRYKLDCLLNLHFYYIEFIPKPADRRYQMFGLFVIDALPKEA
EKLDVELHLARARIVKAGIKYLGMITFNKEEMMLAHNFQEMFLKVLLDRSEFTSSYVMLG
NDTAFQMDSTFYLLLPIKQKFYGDKFIIDWPAVKRCLSSPVFQDPTSLSLHDSYLPNESL
KLLDGTYSKADVIGSLVFTPHNNLFFFVDDILDEINGKSEFNGATYAAHFEERFDIELSH
PEQPFLRAKQLFNLRNLLHNRQQESTESEGRELMEHFVELPPELCSLKITGFSKDMGSSL
SLLPSLMCHLENLLVALELKDVMLSYFPEASQISASGILEALTTERCLERISLERFEVLG
DAFLKYVVGRHNFISYEGLDEDQLTRRRSDIVNNSNLYELSIRRNLQVYIRDQQFEPTQF
YALGRPCKVVCNPETEASLHPKNIDPDKRDNCNLRCTKSHHWLHRKTIADVVESLLGAFI
VESGFKAAFAFLNWMGINVDFKDDALYRVLDASSANLSLMDYINISELEELIGYKFKHKG
LLLQAFVHPSFNKHSGGCYQRMEFLGDAVLEYLMVSYLYSAYPDLKPGQITDLKSLAVNN
TSFAYVAIKKSMHKYLIKDSKYLMAAVNKFENYFNLSNSEKDLSEEPACPKVLGDIVESC
VGAVLLDSGFNLNHAWKLMLMLLKPILSFCDMHINPLRELRELCQCNGFDLGLPKPIKAD
GEFHVKVEVNVNGKMISCTAANQNSKHARKLAAQDTLSKLKNYGYKHKSKSLEEILRTAT
KKEPELIGYDEEPIKVDGVPLEMKNLQMNGEMEENIFFGNNEAFFIGRSATSIQRTGEDN
KVDRNDANNGRINKSNVVTQNGCLPRGEAAKINKKEYHGDMVHKTARSFLYELCAANYWK
PPEFELCKDEGPSHLRKFTCKVLVQIMGPSATLLECYSDPKLQKKAAQEHAAQGALWCLK
QLGYLPKDETHV
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagggagaagacgaggcctcgagctccgccgcggcggcgagcgcggccgcgggc
ggccccaaggacccgaggaatatcgcgcgcaagtatcagctggatctttgcaagagggcg
gttgaggagaacatcatagtgtaccttggcacaggatgtgggaagacacacattgctgtg
ttactcatgaatgagcttggacacctcatccgcaaacccagccgtgaggtgtgcgtcttc
cttgcaccgaccattccccttgtgcgccagcaagcaacagtgattgcggattccaccaat
tttaaagttcaatgttaccatggaagcggtaaaaacttaagagaccaccaggcatgggag
aaagagatggccgagtatgaggtccttgtaatgatacctcaaatattattgcgtaatttg
cggcattgtttcatcaagatggattcaatcgtacttttggtatttgatgaatgtcatcat
gcacaagcacaaaaaaggcatccatatgcgcaaattatgaaggaattctacaacaacgtt
gataaacctcctcgtgtctttggcatgactgcttcaccaattattggaaaaggtgggtct
aacaagcttacgtacactaaatgtatcaatagtcttgaggaattacttaatgcaaaggtt
tgttcaattgataatgtagaacttgaaagtgtggttgcttctcctgatattgaagtgtac
ttttatggcccagttggccactctaacttgactgcaacttacagcaaagggcttgatggt
tataagctccagtctgaatgcatgctaagagagagcctatgcaatttcaaggagtcccag
aagaaactgaagaccttgtggaggttgcatgaaaatttgattttctgcttgcaagaagtt
ggtctttttggagctttgcaagctgcaaggacctttctatcttctggtggtggtagtctt
gatagaaaggggtttgacataaatgacaatcatgccagttttgtacagcactatctacac
aaagcaatttctcttctaagctgcgacatattagatggtgctgatgctgattctgttgat
ctggagacactggaggaacctttattctcaaaaaaatttgcagttcttattgacgttctg
tcaagatacaggctagaggaaaacatgaagtgcattgtttttgtgaaaagaatcattgtc
gcaagagtaatctcacatattctccaaaacctgaagtgccttgatttctggaaatgtgag
tgtcttgtgggatgccactcaggattgaagaacatgtcaaggaacaagatgggttctatc
attgaaaagttctcttcgggtgaggtgaaccttttggttgctactagtgtaggtgaggag
ggacttgacattcagacatgctgccttgttgtgcggtttgatctcccagaaactgtttct
agctttatccagtcaaggggacgtgcccggatgagtaaatctaaatacattttcctcctg
gagaggggaaaccaatctcaggagaagttgcttggtgattatattactggcgaaagtatt
atggataaagaggttaacttgagaacttcaaatgatatgttcgattcccttgaggagaac
atctatcgagtgaacaacactggtgcttccattagcactgcttgcagtgtatctctatta
cattgctattgtgacaaccttccaagagataggtttttttttccttctccatcattcttc
tatgttgatgatgttgaaggaatagtctgcagactaattctcccaccaaatgctgctttt
cgtcaagtgaacagtcaaccctgtccatcaaaagatgaagctaagagagatgcatgcttg
aaagcatgcataagacttcacgaactgggtgctttgacagattttcttctgccgggccaa
ggctctagaaagactaaggtatcaacaacagatatattagaaagcaacaaagctgaggat
gaaagttttagggaagaacttcatgagatgttggttcctgcagttctgagatcttcaaga
tacaaactggactgtttgttgaacttgcatttctactacatagaatttattcccaaacca
gcagatagacgatatcagatgtttggtctttttgtgatcgatgcccttccaaaggaagct
gaaaagttggatgttgaattgcatcttgcacgtgcgaggattgtgaaagcaggaattaaa
tatttgggaatgattacttttaacaaagaggagatgatgctcgcacacaatttccaagaa
atgtttttgaaagttctcttggacagatctgagttcacttcatcttatgttatgttgggg
aatgatactgcgtttcaaatggattcaacattttacctgttgcttcccatcaaacagaaa
ttctatggtgataaatttattattgattggccagcagtaaagcggtgcttatcatcacct
gtatttcaagatccaacgagtttatctctgcatgactcatatttgccaaatgagtctttg
aagcttcttgacggaacatacagtaaagctgatgtgattggcagtttggtcttcactccc
cacaacaacctgtttttcttcgttgatgacattctggatgaaataaatggtaaaagtgaa
ttcaacggtgcaacttatgcagcacattttgaggaaaggtttgatatcgagctatcccat
cctgaacagccatttttgagagcaaaacaactcttcaatctacgcaatctgctgcataac
cgacaacaagagagcacagaatccgagggccgtgaattgatggagcacttcgtggagtta
cctccagagctatgctctttgaagataactgggttctcaaaagatatgggtagttctttg
tccttgctaccgtctttaatgtgtcacttggagaatttgttggtggctctcgagttgaag
gatgtcatgttatcttatttcccagaggcttctcaaattagtgcttctggtatccttgaa
gcgctgactactgaaaggtgtttggagaggatctcgttggagcgatttgaagtcctaggt
gatgctttcttgaagtatgtagttgggcgccataactttatttcatatgaaggacttgat
gaagatcagttgaccaggagacgttctgatatagtgaataattcaaatttatatgagtta
tcaattagaagaaatttgcaggtatacatacgggatcaacagtttgaacctactcagttc
tatgcactgggaaggccatgtaaggtggtttgcaatcctgaaacagaagcgagtttacac
ccgaagaatatcgacccagataagcgagacaactgtaacttgaggtgtacaaagtcacat
cattggttgcatagaaagacgattgcagatgttgttgagtcacttcttggagcatttatt
gttgagagtggattcaaagctgcatttgcattcctaaattggatgggaataaatgttgat
tttaaagatgatgctctctatagagtattagacgcaagctcggccaatttgtctctcatg
gattacatcaacatttctgagcttgaagaattgataggttacaaattcaagcacaagggt
ttacttctccaagcatttgtacacccttcattcaataaacattctggaggatgctaccag
aggatggagttccttggagatgctgttttggaatatttgatggtctcatacctctactct
gcttacccagatctcaagcctggtcaaataacagatctgaaatcattagctgtcaataac
acttcatttgcttatgtagcaattaagaaatctatgcataagtatcttataaaggattct
aaatatcttatggcagcggtaaataaatttgagaattattttaatctttccaattcagag
aaagatttgtcagaagaaccagcatgtccaaaggttcttggtgatattgttgaatcttgt
gttggtgcagtgcttttagattccggcttcaacctgaaccatgcttggaagctaatgcta
atgcttctaaagccaatattgagcttctgtgacatgcacataaatcctctgagagaactc
cgtgaactttgtcaatgtaatggttttgacttaggccttcccaaacctattaaggctgat
ggagagttccatgtcaaagtggaagttaacgtaaacggcaagatgataagttgtacagca
gcaaaccagaattcaaaacacgctagaaagttggctgcacaagatacactttctaaactg
aagaattatggatacaagcataagagcaaatcactggaggagattttgcgtactgccaca
aaaaaagaaccagaattaataggctatgatgaagaaccaatcaaagttgatggtgtacct
ttagaaatgaagaatctacagatgaatggagaaatggaggaaaacatcttttttggaaat
aatgaagcatttttcattgggaggtctgcaacctccattcagagaacaggagaagacaac
aaggttgacaggaatgatgccaataatggaaggatcaataagtccaatgtggttacgcag
aatggttgtctacctagaggggaagctgctaaaataaacaaaaaagagtatcatggtgat
atggtacacaaaacagcaaggtcattcctttatgaactatgtgctgcaaactattggaaa
cctcctgaatttgagttatgcaaagacgaaggaccaagtcaccttcgaaagttcacttgc
aaggtccttgttcagatcatgggaccttcagcgactcttttggagtgctacagcgatccc
aagctacaaaagaaagccgcgcaggagcatgccgcccagggggctctctggtgcctcaag
caacttggatacctcccaaaagatgaaactcatgtctag
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integrated database retrieval system
