Setaria italica (foxtail millet): 101767371
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Entry
101767371 CDS
T02818
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101767371
03041 Spliceosome [BR:
sita03041
]
101767371
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101767371
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101767371
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_10
RRM_PARP14_3
RRM_occluded
RRM_5
Motif
Other DBs
NCBI-GeneID:
101767371
NCBI-ProteinID:
XP_004973927
UniProt:
A0A368RNS4
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All DBs
Position
VI:32970582..32975467
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AA seq
446 aa
AA seq
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MNGAGGGHQQQQQRLRQQQQQQQQALLMQQALQQQQQYQSGVLAAAAAAAMTQMEPISNG
NLPPGFDPSTCRSVYVGNVNPNVTESLLIEVFQSAGLVERCKLIRKEKSSFGFVDYYDRR
SAALAIMTLHGRHIYGQAIKVNWAYASTQREDTSGHFHIFVGDLSSEVNDATLYACFSAY
PSCSDARVMWDNKTGRSRGYGFVSFRNQQEAENAITEMTGKWLGSRQIRCNWATKNNSEE
KPETDNHNAVVLTNGGSSNSATDASQDGGSKENPENNPDCTTVYVGNIGHEVNRDELHRH
FYNLGVGAIEEIRVQQEKGFGFVRYSNHGEAALAIQMANGLVVRGKPIKCSWGTKPTPPG
TASKPLPPPVAPYQPAVAMPGVPQGFTAAELLAYQRQLALSQAAAGQIAGQHGLAGQVSA
GLLAGSQALYDGYPNQSSAQQLMYYN
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgccgggggcggccaccagcaacagcagcagaggctccggcagcagcagcag
cagcagcagcaggctctcctgatgcagcaggcactgcagcagcagcagcagtaccagtcc
ggcgtcctcgcggccgcggcagcggcggccatgacccagatggaacctatttccaatggc
aatcttccacctgggtttgatccctccacttgtcgcagtgtgtatgtgggaaatgtgaac
cctaacgtcactgagagccttctgattgaagttttccagagtgctggccttgtggaaaga
tgcaagctcatccggaaagagaagtcttcctttgggtttgtggattactatgatagaaga
tctgctgctctagcaataatgacccttcatggtcgtcacatatatggacaagcaatcaag
gtgaactgggcgtacgcaagtacgcagagggaggacacatctgggcatttccatattttt
gttggtgatttaagttctgaagtgaatgatgcaactctttatgcctgtttctcagcatat
ccttcttgttctgatgctcgagtcatgtgggacaacaaaactgggcgctccagaggttat
ggttttgtctccttccgtaatcaacaggaagctgaaaatgctataactgaaatgactgga
aaatggcttggaagcagacaaataaggtgcaactgggcaacaaagaacaattcagaagag
aaaccagaaactgacaatcataatgcagttgtactaacaaatggtggctcgagtaattca
gcaacagatgcaagccaggatggaggaagtaaagagaacccagagaacaaccctgattgt
actactgtatatgttggcaacattggacatgaggttaaccgagatgagcttcaccgacac
ttctataacttaggggttggggcaatcgaggaaattcgtgttcaacaggagaaagggttt
ggatttgtgagatatagcaaccatggtgaagcagcattagctattcagatggccaatgga
ttggtagtccgcgggaagccaattaagtgctcatggggcaccaaaccaactccacctggt
actgcatccaagcccctacccccaccagttgctccgtaccagcctgctgttgcaatgcca
ggcgtcccgcaaggcttcacagcagctgagcttctggcttaccagaggcagcttgcctta
agccaggctgcggcagggcagattgcagggcagcatggtctcgcgggtcaggtttctgca
gggcttcttgctggttcccaggccctctacgatggctacccaaaccagtcatctgctcag
cagcttatgtactacaactag
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