Setaria italica (foxtail millet): 101767397
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Entry
101767397 CDS
T02818
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101767397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101767397
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101767397
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40
eIF2A
WD40_Prp19
Beta-prop_WDR3_1st
WD40_MABP1-WDR62_1st
Tricorn_2nd
Beta-prop_WDR36-Utp21_2nd
DUF7165
Motif
Other DBs
NCBI-GeneID:
101767397
NCBI-ProteinID:
XP_004977456
UniProt:
K3Y7F0
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All DBs
Position
VII:complement(34658434..34663972)
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AA seq
437 aa
AA seq
DB search
MPSFPPPGAVTVCEINRDLVAADSLSDDRAKEAYGDVLGMVFSPIPFQPDALPPIREPPA
AEQTESNENVPAASVTSSISEFFKRMIFPPQEPNLLQKFDTQKISWNPHKHCLAFVSGKN
QVTVHDFEDSDAKEPCILTSDHVKAIEWRPNSGKMIAVACKGGICLWSASYPGNAPFMKA
GVTSSSLSAFRSGDQWILVDVLRDSSAEQVSALCWKPDGRYLASASCNSPSFTIWDVSQG
LGTPIRRGLSNISLLRWSPSGDYLLAAKFDGTFHFWETNTWTSEPWSSSNGYVSGANWDP
EGRVALLSFSNSTTLGSIHFSSKPPSLDAHLLPVELPEISSLIVSRGIEKLAWDASGERL
ALSFKDGNEMYRGLVAVYDVRRSPLVSLSLVGFIRGPGEGAKPLAFAFHNKFKQGPLLSV
CWSSGWCCTYPLILHSH
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcttccctcctcccggcgccgtcactgtctgcgagatcaaccgcgacctagtt
gcggcagattccttgtccgacgaccgcgccaaggaagcatacggggatgtccttggaatg
gtcttcagccccatccctttccagccagacgctcttccccccatccgcgagccccctgct
gctgagcaaactgagtccaatgagaatgtacccgcagctagtgtgacttcctccatatca
gagttcttcaaacggatgatcttccctccacaagaaccaaatctgctacaaaaatttgac
acccagaaaataagttggaatccgcacaagcattgtctagcatttgtgtccgggaagaac
caggttacagtacatgactttgaggattcagatgctaaagagccgtgcattttgacaagt
gaccatgttaaggcaattgagtggagaccaaatagtggcaagatgattgcagttgcctgc
aagggagggatatgcctctggtcagcatcatatcctggcaatgctccattcatgaaagct
ggggtcacctcttcttcccttagtgccttccgttctggtgatcagtggatactggtggat
gttcttcgtgattcttctgctgagcaagttagtgcactttgttggaagcctgatggaaga
tacttggcatctgcctcctgcaatagtccatcttttacaatttgggatgtttctcaaggg
ttgggtactcctatacggcgtggattaagtaatatatcactactgcggtggtcacctagt
ggagattaccttctagctgctaaatttgatggaacttttcacttctgggagacaaacaca
tggacttcagaaccttggtcttcatctaatggatatgtgtctggagcgaattgggatcca
gaaggtcgtgtcgcattgttatccttttctaactcgacaacacttggctcaattcacttt
tcatctaagccaccatctttagatgcccatctcctaccggttgaacttccagaaatttcc
tccctgattgtaagccgaggcatagagaaattagcatgggatgcttcaggggagcgtctg
gcattgtcgttcaaagatggaaatgaaatgtaccgtggccttgttgctgtatatgacgtg
aggagatctccacttgtctcactatcactagttggattcattagaggacctggagaagga
gcaaaaccacttgcttttgcttttcataacaaatttaagcaaggacccttgctttctgtg
tgctggagcagtggctggtgctgtacatatccactgatacttcattcccattaa
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