Setaria italica (foxtail millet): 101768094
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Entry
101768094 CDS
T02818
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101768094
03036 Chromosome and associated proteins [BR:
sita03036
]
101768094
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
101768094
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
101768094
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
SPT6_acidic
HHH_7
YqgF
Spt6_S1
HTH_44
HHH_9
Tex_central_region
SH2
Tex_N
Acetyltransf_2
Motif
Other DBs
NCBI-GeneID:
101768094
NCBI-ProteinID:
XP_004961640
UniProt:
K3Z338
LinkDB
All DBs
Position
III:complement(14690437..14698992)
Genome browser
AA seq
1653 aa
AA seq
DB search
MGRTVLSDDEEEELEEVDEEDQRPSRRDRDDGEDDEDEEDDEEGQDEFEKDGFIVDDEED
EDEEEEQRSDDERRKKKRKKRKDSEDFMLDEDDYMLLQDNNITGISRPKPGNKFKRLKKA
GRESEMDERGLSDDDGTGKKRTGKDRVEYSLFGDAQDAAPIEEDFIEDDQPVDDNDVDDD
DDEMADFIVEEDEIDGNGQVVRRKKVKKKVPRQAAGVSSSALQEAQDIFGDVDDLLARRK
QEIEREAANSGELRGKRLEDEFEPFILAEKYMTTKDEQIKENDVPERIQLSEELTGYPPT
DTTRTDEESLWIHNQLTGDGFLSFYGNEHMNKDIDQKDIVNVLNMLHINKFEIPFIAMYR
KEMCPSLLSDLDSNEQANEHDKRTMRWHKLLWAVQTLDRKWLLLQKRKVALEMYYEKRFD
DEKRRIDDVTRQELNQQLYDSIIEALKDAKSEKEVEDVDAKFNLHFPPGEVEEEGQFKRP
KRKSLYSICHKAGLWEVASQFGRSAEQLGHHLTLTKIPEAGELDSGKGSPEEVAANFTCA
MFETAQDVLRGARHMAAVEIGCEPIIRKHIRGIFMKKAVVSTSPTHEGNTIIDPYHQLSG
VKWLREKPLSKFVDAQWLLIQKAEEEKLLKVTVKLPENAKKELMSDARENYLSDCVSKTA
QLWDEQRKMILDDAFFNFLLPSMEKEARSLLTAKAKNWLHMEYGKQLWNKVTVAPWKKKD
ADKKDADIDLDDESELRVMACCWGPGKPATTFVMLDSSGELVDVLYAGSISNRSQGVAEQ
QRKKNDQQRVLKFMTDHQPHVVCVGASNYNCRQLKDDIYEVIFKIVEDHPRDVNPQMENF
SIVYGDESVPRLYENSRISSDQLPGQSGIVKRAVALGRYLQNPLAMIATLCGPGKEILSW
KLHALEQFLTPDEKYDVVEQVMVDATNQIGFDVNLAASHEWHFSTLQFIAGMGPRKASAL
QKDLVREGSIFSRKELVKPLGRKVFMNASGFLRVRRSGAAAASAQIIDLLEDTRIHPESY
VIAKNLAKDVYAESAPHDVNEMDDDEQEMAIEHVRENQGLLKGLDIDEYIKSISEEFRKK
ETLKDIKHELLSGFSDWRTPYTEPSPDEEFWMLSGETEDTISEGRIVQVTVRNIQENKII
CTFDSGLKAIVMADNYSDQGFDPESSQLHEGDVLTGKIRNVNKNRFMVYLTCKASEMRRR
PFSRGDQDPYYHEQDMTSQTVEDKARKQKELAKKHFKPRMIVHPHFQNLTAEEAMQFLSD
KEPGEKVIRPSSRGPSFLTLTLKIFDGVYAHKEITEGGKDHKDITSLLRLGKTLTIDNET
FEDLDEVIDRYVDPLVGHLKSMLSYRKFRKGLKNEVDELLRAEKAENPMRIVYSFGISHE
HPGTFILSYIRSTNPHHEYVGLYPKGFRFRKRDFDSIDRLVSYFQKNIDKPPPDAGPSMR
NVAAMVPMKNSAWGSGGGANDGWRGDSNNDRDRSGGRFDSRNSSGGRGRGRGRGRGNFGN
DNNGGGWSGGGSGNGGGWTDNIGSGGGGWGTGGSGGSSWGAGGTGGGDAAGWGGAGGDSN
SGGGGGGTWGAAVGGTDGGGSGGGWGTVAGGSSDSGWGSAKKAVPAQDGGSGWGSGGGGG
GGSNDSGWGSAKKAVPAQDGGNSGWASGGGGGW
NT seq
4962 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcacggtgctctccgacgatgaagaggaagagctcgaggaggtcgacgaggag
gatcagcggccctcgcggagggatagggacgatggagaggatgatgaagatgaagaagat
gatgaagaggggcaggatgaattcgagaaggatggcttcatagttgatgatgaagaggat
gaagatgaggaagaggagcagaggagtgatgatgagaggcgtaagaagaaaaggaagaag
agaaaggattcagaagacttcatgcttgatgaggatgactacatgttgctgcaggataat
aatatcactggcatcagtcggccaaagcctggaaataagtttaagcgattgaagaaagct
ggaagggaatctgaaatggatgagcgtggtttgtcagatgatgatggaactgggaaaaaa
cgtactggcaaggatagagttgagtacagtttatttggcgacgctcaagatgctgcaccc
attgaggaggacttcattgaggacgatcagccggtagacgataatgacgttgatgatgat
gatgatgaaatggcagatttcatcgtggaggaagatgaaattgatgggaatggccaagtt
gtaagaaggaagaaggttaaaaagaaggtaccacgacaagctgctggtgtatcatcatct
gctctgcaagaggcccaagacatatttggtgatgttgatgacttgctagcgcgaaggaag
caagagattgagagggaggctgctaactctggtgagttgagggggaagaggcttgaagat
gagtttgagccatttatccttgcagagaagtatatgacaacaaaagatgagcaaataaaa
gaaaatgatgtgcctgagaggatacagttatctgaagaattgactggctatcctccaacg
gataccacgaggacagatgaagaaagtttatggatacacaaccaactaactggcgatggg
tttctgtccttctatggcaatgagcacatgaacaaggatattgaccagaaagatattgtt
aacgtcctgaacatgttgcatatcaacaaatttgaaattccattcattgctatgtacaga
aaggagatgtgcccaagcctgttaagcgatcttgattccaatgaacaggctaatgaacat
gataagcgcacaatgaggtggcacaagctgctctgggcagttcagaccttagacagaaag
tggctacttcttcagaagcgcaaagtcgctttagaaatgtattatgagaaaagatttgat
gatgagaaacggaggattgatgatgtcacaaggcaggaactaaatcagcaactgtatgat
tccatcattgaagcactaaaggatgctaaatctgagaaagaggtggaggatgttgatgca
aaatttaatttacattttcctcctggtgaagtcgaagaagaaggccagtttaaacgacca
aaaaggaaatccttgtacagtatctgtcacaaggcagggttatgggaagttgccagccaa
tttggacgtagtgctgagcaattaggtcaccatctgacattaaccaaaatacctgaagca
ggtgagcttgatagtggaaaaggctcaccagaagaggttgctgctaatttcacatgtgca
atgtttgaaacagcacaagatgttcttcgtggcgctagacacatggcagcggttgagata
ggttgtgagccaattataagaaagcatattcgaggcatcttcatgaagaaagcagttgtg
tcaacaagccccacacatgagggcaatacgatcatagatccataccatcaactatcaggt
gttaagtggctgagagagaaaccgttgagcaagtttgtagatgcacagtggctacttatt
cagaaagcagaggaagaaaagctcctcaaggttaccgtgaaattgcctgaaaatgcgaag
aaagaactcatgtctgatgcacgtgagaattatctaagtgactgtgtcagtaagactgca
caattgtgggatgagcaacgtaagatgatactggatgatgccttctttaatttccttctt
ccatcaatggaaaaggaggctcgatcacttttgacagcaaaagctaaaaattggctccat
atggaatatgggaaacagttatggaacaaggttactgttgctccttggaaaaagaaggat
gcagacaagaaggatgctgacattgatttggatgatgaatcggagttgagagtcatggcc
tgctgctggggtcctgggaagccagcaaccacctttgtaatgttagactcatcaggagaa
ttagttgatgttctatatgcaggttctatcagcaacaggtctcaaggtgttgctgagcag
cagcggaagaagaatgaccagcagcgagttttaaagtttatgactgaccatcaaccacac
gttgtatgtgtaggagcatcaaactacaattgcagacaactcaaggatgatatttacgag
gttatttttaaaattgtagaagaccatccaagagatgttaacccacaaatggaaaatttt
agcatcgtctatggtgacgagtctgtgcctcgcttgtatgagaactcacgaatctcttcg
gatcaacttcctggccagtcaggtattgtgaagcgtgccgtggctcttggacgttacctt
cagaatccattggcaatgattgcaacactatgtggacctggaaaagagatactttcttgg
aaactgcacgcgcttgaacagtttcttactcctgatgagaagtatgatgttgttgagcaa
gtaatggttgatgcaacaaatcagattggttttgacgttaatcttgctgctagccatgag
tggcatttctcgactttacaatttattgctggtatgggtccgcgcaaagcttcagctttg
cagaaagatctggtaagagagggatcgatttttagtcgcaaggagcttgtaaaacctcta
ggcaggaaagtgttcatgaatgcttctggtttcttacgtgtccgacggagtggtgcagct
gcagccagtgctcagatcattgatctgcttgaggatacaaggatccatcctgagtcatat
gtaattgcaaaaaatttggctaaggatgtctatgctgagtctgcaccacatgacgtgaat
gagatggacgatgatgaacaagagatggcgattgagcatgttagagaaaaccaaggtttg
cttaagggtcttgacattgatgaatatataaagagtatttcagaagaattccgtaaaaag
gaaacactgaaagacataaagcatgagctgctttctggtttctctgactggaggacccct
tataccgagcctagcccagatgaggaattctggatgctttctggtgaaactgaggatacc
atatctgagggaaggattgttcaagtaactgttcgtaatatacaagagaacaaaatcatt
tgcacctttgattctggtttgaaggccatagttatggcagacaactattctgatcagggc
tttgatcctgaatcatcgcagttacatgaaggcgatgtattaactggcaaaattaggaat
gtgaataaaaataggttcatggtttacctaacatgcaaggctagtgaaatgaggagaaga
ccattctccagaggtgatcaagacccttactatcatgaacaagacatgacctcgcagact
gtagaggataaggctcggaaacaaaaggaacttgcaaagaaacatttcaagcccaggatg
attgttcatcctcactttcagaacctgacagctgaagaagccatgcagttcttatcagat
aaagagcctggtgagaaggtcatccggccaagttctcggggaccatcatttttgactctt
accctgaaaatttttgacggtgtttatgcacataaggagattactgagggtgggaaggat
cacaaagatatcactagtttgcttcgactgggaaaaacactgacaattgacaatgaaact
tttgaggaccttgatgaggttatagacagatatgtggacccattggtagggcacctgaaa
agcatgctctcctatcgtaagttcaggaaggggttgaaaaatgaggttgatgagttgtta
agagcagagaaggcagagaatcctatgagaatagtatatagctttggcatatctcatgaa
catcctggcacctttatattgtcatatattaggagtacaaatccacatcatgagtatgtc
ggactatacccaaagggcttcagattccggaaaagagactttgacagcattgatcgccta
gtgtcatatttccagaagaatattgacaaaccaccaccagacgccggaccatcaatgcga
aatgttgccgcaatggtgcctatgaaaaattcagcttggggttctggtggcggtgcaaac
gatggatggaggggagatagtaataatgatagggatagatcaggagggaggtttgattcg
aggaacagttctggtggtcgtggtcgagggcgtgggcgtggtcgaggcaactttggcaat
gacaacaatggtggaggctggagtggtggtggcagtggcaacggtggaggctggactgat
aacattggcagtggcggtggtggatggggcacaggtggcagtggtggctcttcttggggt
gctggtggtaccggcggaggagatgctgctggatggggtggagctggcggtgacagcaac
agtggtggtggcggtggaggcacctggggagcagcggtcggtggtaccgacggtggtgga
agtggaggggggtggggaacagttgctggtggctcaagcgactcaggatggggcagcgcc
aaaaaggccgtaccagcacaggatggtgggagcggctggggatctggcggtggcggtggt
ggcggctctaacgattctggatggggaagtgccaaaaaggctgtaccagcacaggatggt
gggaacagtggttgggcctccggcggtggcggtggctggtga
DBGET
integrated database retrieval system
