Setaria italica (foxtail millet): 101768233
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Entry
101768233 CDS
T02818
Name
(RefSeq) serine/arginine-rich-splicing factor SR34
KO
K12890
serine/arginine-rich splicing factor 1
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101768233
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101768233
Spliceosome [BR:
sita03041
]
Common components
Common spliceosomal components
SR proteins
101768233
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
101768233
NCBI-ProteinID:
XP_004962312
UniProt:
K3Z8N7
LinkDB
All DBs
Position
III:complement(24294803..24298972)
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AA seq
279 aa
AA seq
DB search
MTRRNGCTIYVGNLPGDIREREVEDLFYKYGRIVEIDLKIPPRPPGFAFVEFEDPRDAED
AIYGRDGYNFDGHRLRVELAHGGRGPSFDRSSSHNSVGRRGATRRSDYRVMVTGLPSSAS
WQDLKDHMRRAGDVCFSDVYREAGATIGIADYTNYEDMKHAIRKLDESEFRNAFSRSYIR
VREYDARRSRSRSRGRSHSRSKSRSRSRGRSYSRSRSHSYSRSRSPRSRSASQSRSPVKA
RSPSRSQSPRASPPRDKSASRSPARSKSLPRSDSPAKAE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgacccggcggaacggctgcacgatctacgtgggcaatctccccggtgacatccgcgag
agggaagtagaggatctcttctacaagtatggccgtatcgtggaaattgacctgaaaatt
cctccaaggcctcctggttttgcttttgttgagtttgaggacccacgtgatgctgaagat
gcaatttatggtcgtgatggatacaattttgatggccataggttgcgggtggaattagct
catggtggaagaggcccatcttttgatcgatcaagcagccataatagtgttggacgccgc
ggtgcaactaggcgatctgattaccgcgttatggttactggactaccttcttcagcatca
tggcaagatctcaaggatcatatgcggcgagctggtgatgtctgtttctccgatgtttat
cgtgaggctggagctactattggaatagctgattataccaactatgaagatatgaaacat
gcgataaggaaacttgatgagtccgagttccgtaatgcattttcacggtcatatatcagg
gtgagggagtatgatgcgaggcgcagccgctctcgctccagaggcagaagccatagccgc
tctaagtcaagaagcagaagccgcggacgctcttactcgagaagcagaagccacagttat
agcaggagcaggagcccaagatcgagatctgcttctcagtcacgatcacctgttaaagca
agatcaccatccagatcccagtcacctcgtgcttctcctccgcgcgacaagtccgctagc
aggagccctgccaggagcaaaagtctgccccgatctgattctcccgcaaaagctgagtga
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