Setaria italica (foxtail millet): 101768459
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Entry
101768459 CDS
T02818
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sita03016
]
101768459
Enzymes [BR:
sita01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
101768459
Transfer RNA biogenesis [BR:
sita03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
101768459
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
101768459
NCBI-ProteinID:
XP_004975653
UniProt:
A0A368RU86
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Position
VII:complement(20434649..20438280)
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AA seq
624 aa
AA seq
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MEDIEDVLGPAGLSGGGAPPGLRLPLSTVAVKPKRRSSRVAQTPPQPEARIPGTQTIYVK
TFGCSHNQSDSEYMSGQLSAFGYAITEEPEGADLWLINTCTVKNPSQSAMTTLISKCKNA
KKPLVVAGCVPQGSQGLKELEGISIIGVQQIDRVVEVVEETLKGHEVRLLSRKTLPSLDL
PKVRKNKFIEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVDRVKIVVSEGVREIWLS
SEDTGAYGRDIGTNLPNLLNAIVAELPADRSTMLRIGMTNPPFILEHLKEIAAILCHPCV
YSFLHVPVQSGSDAVLTGMNREYTVGEFRKVVDTLCELVPGMQIATDIICGFPGETDEDF
AETVNLVKDYQFPQVHISQFYPRPGTPAARMKKVPSNDVKKRSRELTSVFESFSPYQGME
GKVERIWVTMIATDGVHLVGHTKGYIQVLVIAPDSMLGTSAVVRITSVGRWSVFGEVIEG
SVVVGEAPKQISIVPQKEHRQNQVEEADCCGADSCGTCACSDVVQNCVPEQCKNTPDAHQ
TIDDVNRQEAIQSTLVRRNVEGSTKASESSAVTRSVGQEQQVNFVTRRGLNVDTILWCGL
ALSFAATVALLVLLTSKISSTSSN
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atggaggacatcgaggacgtgctaggcccggccggcctctccggcggcggggcgcctccg
gggctccgcctccctctctccacggtcgcggtcaagcccaagcgccggtcgtccagggtc
gcgcagacaccgccccagcccgaggcccggattcctggcacgcagacgatatacgtcaag
acgttcgggtgctcacataaccagagtgacagtgaatacatgtcagggcagctctcggca
tttggatatgctattactgaagaacccgaaggagcagatttgtggctaattaacacatgc
acggtgaaaaatcctagtcaatctgcgatgaccacccttatatcaaaatgcaagaatgca
aaaaaaccattagtagtggctggatgtgtaccgcaaggaagccagggtctcaaggagctt
gaaggcattagtataattggagtgcaacagatagaccgggttgttgaagtggttgaggaa
accttaaaaggccatgaggttcggctgttgagtcggaaaacactgccctcacttgattta
cctaaggtaagaaagaacaagtttattgagattcttcctattaacgtggggtgtttaggc
gcctgcacatactgtaagacaaagcatgctcgtggtcatttgggaagctatactattgac
agcttggtggatcgtgtgaaaattgttgtctctgaaggtgtccgagagatatggttgagc
agtgaagatactggtgcttatggcagggatatcggtacaaatcttccaaatctgttgaac
gcaattgttgcagagcttcctgctgaccgaagcacaatgctccgcataggcatgacaaac
cctcctttcatactagagcatttgaaggagatagctgccattttgtgtcatccttgtgtt
tattctttcctccatgttcctgtgcaatctggaagcgatgctgttttaacgggaatgaat
cgtgaatacactgttggtgagtttaggaaggtagttgacactctctgtgagcttgtccct
ggaatgcaaattgcgacagatattatctgtggctttcctggtgagactgatgaagatttt
gccgagactgttaatcttgtaaaggactatcaattccctcaagtccacatatcacagttt
taccccagaccagggacacctgctgctaggatgaagaaagtgccaagcaatgatgtgaag
aagcggagtcgtgaactgacttctgttttcgaatcattttcaccctaccaaggaatggaa
ggcaaggtagagcgaatctgggtaaccatgatagctactgatggtgttcacttggtggga
cataccaagggatatatccaggtgctggtcattgccccagatagcatgctaggaacatca
gcggttgtgaggatcacatcagttggacgatggtctgtattcggcgaggtaatagaagga
tctgttgtagtaggagaagcacctaagcaaatcagcattgtaccgcagaaagaacacaga
cagaatcaggtggaggaagctgattgttgtggcgccgactcttgtggcacctgtgcatgc
tctgacgtggtacaaaactgcgtccctgaacaatgtaagaatacgcccgatgcacaccag
accattgatgatgttaaccgtcaggaggcaatccagtctacgcttgtgaggagaaacgta
gaggggtcaacgaaagcaagtgaaagcagtgctgtaacacgatcggtaggacaggaacag
caggtgaactttgtaactaggagagggttaaatgttgacacgattctgtggtgcggcttg
gccctgagctttgctgcaacggtagccctgcttgttctccttaccagcaagatttcatcg
acatcctccaactag
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