Setaria italica (foxtail millet): 101768533
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Entry
101768533 CDS
T02818
Name
(RefSeq) nuclear poly(A) polymerase 4 isoform X2
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101768533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101768533
Enzymes [BR:
sita01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
101768533
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
101768533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
101768533
NCBI-ProteinID:
XP_012700978
UniProt:
K3XVM2
LinkDB
All DBs
Position
IV:complement(29874051..29880639)
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AA seq
692 aa
AA seq
DB search
MAGGSDAPKQYGITKPLSLLGPVEADLQRTAELEKFLVEAGLYESPEESAKREEVLGKLD
QIVKDWVKQLTSQRGYTDQMVEEANAVLFTFGSYRLGVHGPGADIDTLCVGPSYVNREED
FFIILHEILAQTEDVTELQPVPDAHVPVMKFKFHGISIDLLYASVSLLVVPADLDISQGS
VLYDIDEATVRSLNGCRVADQILRLVPNIENFCTALRCLKYWAKRRGVYSNVTGFLGGVN
WALLVARVCQLYPNAVPSMLVSRFFRVFTQWRWPNPVMLCSIEEDELGFPVWDPRKNPRD
KCHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQFGNKICQEIEMNKASWSALFEPFQFF
EAYKNYLQVDIIAEDDEDLRLWKGWVESRLRQLTLKIERDTYGMLQCHPYPHEYADPSRQ
SAHCAFFMGLSRKEGVKIQEGQQFDIRGTVEEFRHEINSYMFWKPGMELAVSHVRRKQIP
AYVFPEGYKRPRPSRHVNHQQQSNKNDSEDGTATRSPDSQLKRKHDSAGTDDAEPVRSAK
RSSVSPVHPKTFPESGNAGFETTCNNQIRRASSDASGGSQASPQASERSPEPVASGPRCA
SMGAVCSGDATSKHGIPLVESCATPTVAVCTTLKRVAEKVVSELVGSERLGSTNSAELLE
SMEKDVLAENVHFGGNGVAQGGLPEELEMMQV
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcggctccgatgccccgaagcagtacggaataacgaagccgttatcgctgctt
gggccggtggaggcggatctccagaggacggcggagttagagaagttcttggttgaggcg
ggcctatatgagagccccgaggagtctgctaagcgggaggaggtgctggggaagcttgac
cagattgttaaagactgggtgaagcaattgactagtcagagaggatatactgatcaaatg
gttgaagaggcaaatgctgttcttttcacctttggctcataccgtctaggggttcatgga
cctggggccgatattgatactctttgtgtaggaccttcatatgtgaatcgtgaggaagat
tttttcatcatactgcatgagatattagcacaaacagaggatgtgaccgagctgcaacct
gtaccggatgcacatgtccctgttatgaaatttaagttccatggaatatcaattgacctt
ctttatgctagtgtctccctcttagtagtaccagctgacttggatatctctcaaggatca
gtactttatgatattgatgaagcaactgtccgtagccttaatgggtgcagagtagcggac
caaattcttagacttgttccaaatattgagaatttctgcacggcattaagatgtttaaaa
tactgggcaaaaagaagaggtgtttactcaaatgttactggttttcttggtggtgtcaac
tgggctttgctggttgcacgtgtctgccagctctatcctaatgctgtgccaagtatgttg
gtctcgcgattctttagggtttttacccagtggcggtggccaaatccagttatgctttgt
tccattgaggaggatgaacttggtttccccgtttgggatccacgcaaaaatcctcgagat
aaatgtcatcatatgcccattataacccctgcatacccgtgcatgaactctagctataat
gtttcgacaagcacgctgagggttatgatggagcaatttcagtttggtaataaaatttgc
caggaaattgaaatgaataaggcaagctggtcagctctttttgagccttttcaatttttc
gaagcatacaagaattatctacaggttgacatcattgctgaagatgatgaagaccttaga
ctttggaagggatgggtggaatctcgactgcggcaactaactctaaagattgaacgtgat
acatatggaatgctgcagtgtcatccttacccacatgagtatgcagacccttctagacag
tctgcccattgtgctttcttcatgggcttatcaaggaaagaaggtgtgaaaatacaggaa
ggtcaacagtttgatattcgtggaacggtagaggagtttaggcatgaaattaactcttat
atgttctggaagcctgggatggagttagctgtttctcatgttcggaggaagcagatccca
gcttatgtatttccagagggttataagagacctcgcccttcgagacatgtcaaccatcag
cagcagtctaataaaaatgattctgaagatggcacagcgacgagatctccggacagtcag
ctgaagagaaagcatgattctgctggaactgatgatgctgaacctgtcaggtctgccaag
aggtcatcagtcagcccagttcatcctaaaacttttccagaatctgggaatgctggtttt
gagacaacatgtaacaaccaaattagaagggcttcaagcgatgcgagtggtggtagccag
gcatcaccacaggcatctgagagaagcccagaacctgttgcgtctggccccaggtgtgcg
tcaatgggggcagtgtgttctggtgatgcaactagtaagcatggtattcctcttgttgag
agctgcgccactccaactgtagcagtatgcacaactttaaagcgggtagctgagaaagtt
gtgtcagagctagttggaagtgaaaggttgggaagcaccaatagtgctgagttactggag
agtatggaaaaagatgttcttgctgaaaatgtgcattttggtgggaatggagtcgcacaa
ggtggccttcctgaagagttagagatgatgcaggtatga
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