Setaria italica (foxtail millet): 101769012
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Entry
101769012 CDS
T02818
Name
(RefSeq) probable pectate lyase 8 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita00040
Pentose and glucuronate interconversions
sita01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
101769012
Enzymes [BR:
sita01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
101769012
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
101769012
NCBI-ProteinID:
XP_004975047
UniProt:
A0A368RR49
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Position
VII:3302480..3308009
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AA seq
473 aa
AA seq
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MTEVAAAPAAAFGARRAGLAVALLLVLVVVAALAGGGSGGKALHGLRHRSTEAAAAVAGG
ARRWLRDSSWPAAAAAATPRAGGDDDGPVAGAVEDPEAVVDDVHVSIRNSTARRNLAYLS
CGTGNPIDDCWRCDQDWHKNRQRLADCGIGFGRNAIGGRDGKIYVVTDPSDDDAVNPRKG
TLRYGVIQDEPLWIIFKRDMVITLKQELIMNSFKTIDGRGANVHISGGACITIQYVSNVI
IHGLHIHDCKPTGNAMVRSSPSHYGWRTIADGDAVSIFGASHIWVDHCSLSNCADGLIDA
IMGSTAITVSNNYFTHHNEVMLLGHSDSYVKDKAMQVTIAFNHFGEGLIQRMPRCRHGYF
HVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTVWQSWNWRSE
GDLLLNGAYFTPSGAGASASYSRASSLGAKSSSMVGSITSDAGALSCRKGVAC
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggtggcggcggctcctgctgcggcgttcggggcgaggcgggcggggctcgcg
gtggccctgctcctcgtcctcgtggtggtcgccgcgctcgcgggcggcggctccggcggc
aaggcgctccacgggctccgccaccggagcacggaggcggcggccgcggtggcgggcggc
gcgaggcggtggctgcgggactcgtcatggcccgcggcggcggcggcggcgacgccgagg
gccggcggtgacgacgacgggcccgttgccggcgcggtggaggacccggaagcggtggtc
gacgacgtgcacgtgtccatcaggaacagcacggcccggcggaatctggcgtacctgtcg
tgcgggacaggcaacccaatcgacgactgctggcgctgtgaccaagactggcacaagaac
cgccagcgcctggctgactgcggcatcggcttcggccgcaacgccatcggtggccgtgac
ggcaagatatacgtcgtcaccgaccccagcgacgacgatgcggtcaacccgcgcaagggc
accctccgctatggggtcatccaggacgagccactctggatcatcttcaagcgggatatg
gtcatcacgctcaagcaggagctcatcatgaacagcttcaagaccatcgacggccgcggc
gccaacgtgcacatctctggcggtgcctgcatcaccatccagtacgtctccaacgtcatc
atccacgggctccacatccacgactgcaagcccacagggaacgccatggtgcgaagctcg
cccagccactacgggtggcgcaccattgccgacggcgatgctgtgtcaatctttggcgcc
agccacatttgggtggaccactgctcgctctcaaactgtgctgatggcctgatcgatgca
atcatgggatccacggccattactgtgtccaacaactacttcacccaccacaacgaggtg
atgcttctgggccacagtgactcctatgtgaaggacaaggcaatgcaggtgacaatagcc
ttcaaccatttcggcgaaggtctcatccagagaatgccaaggtgccggcatggctacttc
catgtggtgaacaatgactacacccactgggaaatgtacgccattggtgggagcgctgag
ccaaccatcaacagccagggcaaccgttaccttgctccgacaaaccccttcgccaaggag
gtgactaagagagttgaaaccgctcagactgtctggcagagctggaactggagatcagag
ggtgacctcctgctgaacggcgcctacttcaccccatccggcgcaggcgcctcagccagc
tactctcgcgcctccagccttggcgccaagtcatcatccatggttggctccatcacctcc
gatgccggggccctgtcctgccgcaagggcgtggcctgctag
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