Setaria italica (foxtail millet): 101769332
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Entry
101769332 CDS
T02818
Name
(RefSeq) protein transport protein SEC16A homolog
KO
K20353
COPII coat assembly protein SEC16
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101769332
Membrane trafficking [BR:
sita04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
101769332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
101769332
NCBI-ProteinID:
XP_012700961
LinkDB
All DBs
Position
IV:complement(330286..338723)
Genome browser
AA seq
1764 aa
AA seq
DB search
MAADFDDTTEDFFDNLVNSDDDADDDRPSLPSAAEAEASAGDLAALTLTDQSDAKPDNHP
APAPLTEHHPAPPNPQLALKEEALLEPEPAVAPPPEAAADQPAVPPPGAAADVPAAAPEA
VSTGSDKGVHAAAPSLKQAHWNDFGGASTGAPGADPFGDLPPGEAEDTFFGGTAAEDQGG
QASLLPASNASAPLDHSFSAGAGNNATDAAGLPDYSFYGVKDTNSANSQFDSATGAAGYA
TDHSTNAQLESADPRYLESLYPGWKYDDTTQQWYQVDTLTDQHVTTEVTSAVASDGIQQQ
QQLSALYLQNDSHAAAGLEPTEVTPQPKPVTQADDQPMPAPHKEEEEEEHEPTLAHPQVE
SLVEHPDAATEAVVEAGSAVLRQETKSEVQETHASADEAAMAPDSGSPGSHKGIHTAIKQ
VQWNDFGSSTSAGGADPFGDLLPEGAEDDLFGATVPGDQGMQASVVGTNNVSTTDHSFSA
GVDNKAAIGAGLTDYSFYGGMDNDAISHFDSTASAAGYGDQSTNAQLDSTDPKYLETLYP
GWKYDAATQQWYQVDTPSAQSYVADNTGAVAVLGSGVQQQQQFNASYLQNSLHSALETIA
EESSANAATWGAAPVEYPPNMLFYAEYPGWYFDTNTQQWQSLESYQQSVAQAATTPAASD
GFAGAGHSLAPCTQDSYASSYGQQSQWQPDSLGNTMQPDVSGGNSLLGSSYSSNQQAENQ
IGQQANAESLQSSVNYKPHIDTFVPSTGQYTGSEGNQASYEGFKPFTGNQSWYKGSEHST
SQEVGYRAFASSTNFQTGHKEFQPPKDHQAGHMAYEPSTRVGYGNSNGPQDFVPKESMYN
TQTHAGSSAHTYVPNNYGGTQTAMDFAQQQLIGTNGPSQQFGFSPHEQRSSAGRPPHAVV
TFGFGGKLVVLKEMSSITANFDSGNKGNSGRMVSVHNISEIVADKIDHSSVANGSALSYF
HALCRQPIPGPLVGGSAASKDVNKWLDDMIAVYESSLTEFQRGDVQKVLISLLKILCQHY
GKLRSPFGSDPSQEGIDGPDMAVTKLLSSCKSSADMKGYGVHCMRNLPSESQIQATAQEV
QNLLVSGRRKEALQYAQEGQLWGPALILALQLGDKFYADTVKKMAHCHLVSGSPLRTLCL
LIAGQPADVFNSENPVNSGDLYTHHQPVEVAPRGMLDDWQENLAIITANRTKGDDLVITH
LGDCLWKEKNEVASAHSCYLVAELNIDSYSESARMCLIGADHLRSPRTFASPEAIQRTEV
YEYAKVLGNSQYILLPFQPYKLIYAYMLAEVGKVSDSLRYCQASLKVLKASGRTPELEAW
KQLFSTLEERIRTHQQGGYATNLAPGKIVGKLFTSLDKSLSRMMGTQSAPMPPLTQGAAN
ERDVYSPPDTKVVNNQSVMSMSPLMSSASEQSMSEMAGNSGPGREVAHNRSISEPDFGRA
PQKQAAGSSKAQSTSGSGSSRFGWLVQKTVGLVSKSHRQAKLGEQNKFYYDEKLKRWVEE
GAEVPAEEPPLPPPPMKSSFQNSIPEPNLNGPPVGGGYTANGFTEAKASNPSEPSSGMPP
MPPTQNQFSARGRMGVRSRYVDTFNKGGGGANAFGAAAMYSKPAAPSMSPLSGAKFFVPT
PAAVASEQTAADATGDAHSETAQQDGPSSSPAVEAAFSSPAPPVPMQSTIQRYPSGDNIQ
RYPSMDNIVAPSDGVNSSMSRSRASSWSGAYPEQLSSTAVSRSPDGQNMRSPMMPGVRPP
HSRSSSNSSLQFNGLGEDLHEVEL
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagacttcgacgacaccaccgaggacttcttcgacaacctagtcaattccgac
gacgacgccgacgacgatcgccctagcctaccatccgcggccgaggcggaggcctccgcg
ggggacctcgccgccctcacccttaccgaccaatccgacgccaagcccgataatcacccc
gcgccggcgccactcacggagcatcaccccgcgccgccgaatcctcaactcgctctaaag
gaggaggcgctgctggagccggagcctgccgtcgcaccaccccctgaggccgcggctgac
cagcccgccgtgccaccacctggggctgcggccgacgtgcctgccgcggcgccagaggcc
gtgtccacggggtcggacaagggcgtccacgccgccgccccctccctcaagcaggcgcac
tggaacgattttggtggtgccagcactggcgcccccggggcagatccgttcggggacctc
ccgccaggtgaagcggaggacaccttcttcgggggtactgctgccgaggatcagggcggc
caggcatcgcttctacctgccagcaatgccagcgcaccactagatcacagcttctccgcc
ggagcgggtaacaatgcgaccgacgctgctgggctgccggattacagcttctatggggta
aaggataccaacagtgccaattcccagttcgactcggccactggtgctgcgggttatgcc
acagatcacagcaccaacgcgcaattggaatctgctgaccccagatatctggagagcctc
taccctgggtggaagtacgacgacactacgcagcagtggtatcaggtagatactctcacc
gatcagcatgttaccactgaagttaccagtgctgtggcaagcgatggtattcagcagcag
cagcagcttagtgctttgtacctgcaaaacgattcacatgcagcggctgggcttgaaccc
acagaggtgactcctcaacccaagcctgtgactcaggctgatgatcagcctatgccagcg
ccacataaggaggaggaggaggaggagcatgagcccacgctggcgcatccacaagttgag
tctctggtggaacatcctgatgctgctacagaggcggtggtggaggcagggtctgctgtc
ctgcgtcaggagaccaagtctgaagttcaggaaacgcacgctagcgctgatgaggctgcc
atggcaccagacagtgggtccccagggtcacataaaggcatccacactgccatcaagcag
gtgcagtggaacgactttggttccagcaccagtgccggtggagcagatccgtttggggac
ctcttgccagaaggagcagaggacgacttatttggggctactgtgcccggcgaccagggc
atgcaggcatctgtggtaggtaccaacaacgttagcacaacagatcacagcttctctgca
ggagtggataacaaggctgccatcggtgctggactgacagattacagcttctatggtgga
atggataacgatgcaatttcccatttcgattccactgcaagcgctgcaggatacggggat
cagagcaccaatgcacaattggactccactgatcccaaatacctggagaccctctaccct
gggtggaagtacgatgcggctacgcagcaatggtatcaggtagatacccccagtgcacag
agttatgttgctgataatactggtgctgttgcagtcctgggcagtggagttcagcagcag
cagcagtttaatgcttcgtacctgcaaaacagtttgcactcagcgcttgagaccattgcg
gaggagagcagtgccaatgccgcgacctggggtgcagctcccgtagaatacccaccgaac
atgctgttctatgcagaatacccagggtggtactttgacaccaacactcagcagtggcaa
tcactcgagtcataccaacaaagtgttgcgcaagctgcaactactccagcagcctcggat
gggttcgcaggggcaggccatagtctagctccctgcacccaggattcttatgcaagtagc
tacggccagcagagccagtggcaaccggattcattgggcaacaccatgcagcctgatgtt
tcgggaggtaatagcttgctgggtagttcctatagttccaatcaacaggctgagaatcag
attgggcagcaggccaatgctgagtcattgcaatcttctgtaaattataagcctcatata
gacacatttgtaccttctacaggccaatacactggcagtgaaggcaatcaggctagttat
gaggggttcaaaccttttacagggaaccagagttggtacaagggttctgagcattctaca
agtcaggaggtagggtacagagcgtttgcatcttcaacgaatttccagactggccacaag
gaattccaacctcctaaagatcaccaggctggccacatggcatatgaaccttcaacaaga
gttgggtatggtaattcaaatggtccacaagacttcgttccaaaggagagcatgtacaat
acacaaacacatgctggctcctctgcacatacatatgtgccaaacaactatgggggcact
cagacagcaatggactttgctcagcagcaactgattggtacaaatggtccatcccaacag
tttggtttctcaccacatgagcagagatcatcagctggacgcccaccacatgccgtggtc
acctttgggtttggggggaagctagtagttctgaaagaaatgagctccattactgcaaac
tttgacagcggaaataagggcaattctggtcggatggtgtcagttcataatatttcagaa
attgttgctgataagattgatcattcaagcgtggctaatggcagtgcgcttagttacttc
catgctttgtgtcgtcaacctattcctggacctcttgttggtggtagtgctgcatcaaag
gatgtgaataaatggcttgatgatatgattgcagtatatgaatcttctctgaccgaattc
cagagaggggatgttcagaaggtgcttatttcgttgttgaaaatactgtgtcaacactat
ggaaaactccgttcaccctttgggtctgacccatcacaggagggtatagatggcccagat
atggcggttacaaaacttctctcatcttgtaagagcagtgctgatatgaaagggtatgga
gtccattgcatgaggaatcttccttcggaaagccagattcaggctactgctcaggaggtt
caaaatctcctagtttctggtagaaggaaagaggcccttcagtatgcacaggaaggtcaa
ctttggggacccgcactgatccttgctttacaacttggtgataagttttatgcggataca
gtgaagaaaatggctcattgccatctggtgtctggatcacctttgaggacattgtgcctt
cttattgctggacaacctgcagatgttttcaattctgagaaccccgtcaacagtggtgat
ttgtatacacaccatcaacctgtagaggttgctcctaggggtatgctggatgactggcaa
gagaatttggctattataactgcaaacaggacaaaaggtgatgacctcgtaattacccac
cttggggattgcctttggaaggagaaaaatgaggttgcatctgcccattcgtgctattta
gttgctgaactaaatattgattcgtactctgaaagtgcaaggatgtgcctcattggtgca
gaccacttgagaagtccacgcacatttgccagccctgaagccatccagagaacggaggtg
tatgagtatgcaaaggttcttggtaattctcagtacatactcttgccatttcaaccatac
aagctgatatatgcatatatgcttgcggaggttgggaaggtttctgattcactgaggtat
tgtcaagcatctctgaaggttctgaaggcctctggtcgcacacctgaattagaagcatgg
aaacaattgttttcaaccctagaggaaaggatacgtactcatcaacagggtggatatgca
acaaatcttgcccctggaaagattgttgggaagcttttcacatcacttgacaaatctttg
tcccgcatgatgggtacacaatctgcaccgatgccgccgctgacacagggcgctgcaaat
gaaagagatgtctattcacctcctgatacaaaagttgtaaataatcagtcagtgatgtcc
atgtcacctctaatgtcttctgcttcagagcagtctatgagcgaaatggcaggaaatagc
ggccctggtagggaagttgcacataacagaagtatttctgagccggactttggcagagcc
ccacaaaagcaggctgctgggtcaagtaaggcacaaagcacatcaggttcaggaagttca
cgctttggatggttggtgcagaagacagtggggcttgtttcaaaatctcatcgtcaggca
aagttaggggaacagaacaagttctactatgatgagaagctgaagcggtgggtggaagaa
ggcgctgaggtccctgctgaggagcctccgcttcccccacctccgatgaaatcctcattc
cagaacagtattccagagccaaacttgaatggtcccccagttggtggaggttataccgct
aatggattcacagaagctaaagcttcgaatccttcggagccaagttctgggatgccaccg
atgccacccacccagaaccaattctcagcacgtggaaggatgggtgttagatcaaggtat
gttgacactttcaacaagggtggtggtggtgcaaatgcctttggtgcagcagcaatgtat
agcaaaccagccgctccatctatgagcccactgtcgggtgcaaaattctttgtgccaact
cctgctgctgttgcttcagaacagacggctgctgatgcaacaggggatgcccacagtgaa
accgctcaacaggatggaccctcatcctcaccagcggtggaggcagcattcagttcaccg
gcaccaccagtaccgatgcagtcaaccattcagcggtacccaagtggggacaacattcag
cggtaccctagtatggataacatcgtggcaccctcagacggcgtcaacagctcaatgtca
aggtcaagagcgtcttcatggagtggagcatacccagagcaattgagcagcactgctgtt
tccagatcacccgatggacagaacatgcggtcaccaatgatgcctggagtaagacctccg
cacagccgttccagcagcaactcatcgcttcagttcaatggtttaggtgaggatcttcac
gaggttgagctctga
DBGET
integrated database retrieval system
