Setaria italica (foxtail millet): 101769385
Help
Entry
101769385 CDS
T02818
Name
(RefSeq) F-box/LRR-repeat protein 20
KO
K10268
F-box and leucine-rich repeat protein 2/20
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101769385
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
101769385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_6
DUF7885
LRR_4
LRR_RPS2
LRR_At1g61320_AtMIF1
LRR_8
LRR_At5g56370
F-box_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
101769385
NCBI-ProteinID:
XP_004953211
UniProt:
K3YSU5
LinkDB
All DBs
Position
I:complement(32318059..32320721)
Genome browser
AA seq
417 aa
AA seq
DB search
MSAPPLGGGGALINEVLTDDELRTVLTRLGPEAERDAFGLVCRRWLRIQSSERRRLRARA
GPDMLRRLAARFPGVLELDLSQNPSRSFYPGVIDDDLNVIAGSFRNLRILALQNCKGISD
VGVAKLGDGLPSLQSLDVSRCIKLSDRGLKAVALGCQKLRQLHITGCKLITDNLLIVLSK
SCLQLEDLGAAGCNSITDAGISALADGCHHIKLLDISKCNKVGDPGVCEIAEVSSSHLVS
IKLLDCSKVGDKSIYSLAKFCHNLETLVIGGCRNISDSSIQALALACSSSLRSLRMDWCL
KITDTSLRCLLSNCKLLVAIDVGCCDQITDVAFQDGEGSGFQSELRVLKISSCVQLTVAG
VSSVIKSFKALEYLDVRSCPQVTRDSCEQAGVQFPSACKVNFYGSLLESDPSAERFF
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgccaccgttgggcggcggcggcgccctcattaacgaggtgctcaccgacgac
gagctccgcacggtgctcacccgtctggggcccgaggcggagcgcgacgccttcgggctc
gtgtgccgccgatggctccggatccagagctccgagcggcggcgcctgcgcgcgcgcgcc
gggccggacatgctgcgccgcctcgccgcgcgcttcccgggagtcctcgagcttgacctc
tcccagaatccctcgcgctccttctaccccggggtcatcgacgatgacctcaacgtcatt
gccgggagcttccgcaacctgcgtatcctggcgctgcagaactgcaaaggtatctctgat
gttggagttgccaaattgggagatggactgccatctctgcagtcccttgatgtttctcgc
tgcataaagctgagcgatagaggtttgaaggcggttgcactagggtgccaaaaattgagg
cagctgcatatcacgggttgcaaattaataactgataatttattgattgttctatcaaag
agctgtctacaattggaagatcttggagctgcaggatgtaacagcataacagatgccggt
atatctgctctagctgatggctgtcatcatataaaattgcttgacataagtaaatgcaat
aaagttggtgatcctggagtctgtgaaatcgctgaggtttcttcatcacacttggtgtcg
ataaagcttttggactgcagcaaggtgggagataagtccatctattctttagctaagttc
tgccataacctagagactcttgtcattggtggatgtcggaacattagcgattcatccata
caagctcttgctcttgcctgctccagcagcttaaggagcctgagaatggactggtgcttg
aaaataacagacacgtcattgcgatgcctgctgtctaactgtaaacttcttgtggcgatt
gatgttgggtgctgtgaccaaataaccgacgttgcatttcaggacggggaaggaagtggg
tttcagtctgaactgagagttttgaagatcagcagctgtgttcagctcacagttgcaggg
gtcagcagtgtgattaaatccttcaaggctcttgagtacctggatgttcggtcatgtcct
caggttacaagggacagttgcgagcaagctggagtacagtttcctagtgcctgtaaggtg
aatttctatggcagcttgctggagtccgatccatctgctgagaggttcttctag
DBGET
integrated database retrieval system
