Setaria italica (foxtail millet): 101769498
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Entry
101769498 CDS
T02818
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101769498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101769498
03009 Ribosome biogenesis [BR:
sita03009
]
101769498
Enzymes [BR:
sita01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101769498
Spliceosome [BR:
sita03041
]
Complex A
U1 snRNP components
U1 related factors
101769498
Complex B
101769498
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
Pre-60S particles
Helicases
101769498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
101769498
NCBI-ProteinID:
XP_004968355
UniProt:
K3XFA8
LinkDB
All DBs
Position
V:complement(10189131..10193953)
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AA seq
668 aa
AA seq
DB search
MASSASAPASKGPRYAPPDPTLPKPWRALIDGNTGYLYFWNPDTKVTQYERPVAAVPASP
SQPPGYSRPEERARSSGPSESRSEAAVSRSQYVPPSDNRTRNDHAEPRSAAGANVSQSAQ
FTNQVSQAANGSQMSTEAYRAKHEITIVGNEAPAPFMTFQSTGFPSEILREVMQAGFSAP
TPIQAQSWPIALKGRDIVAVAKTGSGKTLGYLIPGFILLKRLQHNSREGPTVLVLSPTRE
LATQIQDEAIKFGKSSRISSTCLYGGAPKGPQLRELDRGADVVVATPGRLNDILEMNRVS
LRQVSYLVLDEADRMLDMGFEPQIRKIVKQIPSRRQTLMYTATWPKEVRKIASDLLVNPI
QVNIGNTDQLVANKSITQHVEVISHSEKSRRLDQILRSQEPGSKVIIFCSTKRMCDQLAR
NLSRQYGASAIHGDKSQAERDSVLSDFRSGRCPVLVATDVAARGLDIKDIRVVVNYDFPT
GVEDYVHRIGRTGRAGATGSAFTFFGDQDSKYASDLVKILEGADQSVPPQLKEMASRGGY
GGRSRRWASSDDSYGGQGYGGRRSTDSFNNSSFGNQAGGGSSFHSSFHNSTSGGQFGDTP
SFHGSSRNNQTGDNPSFPPSSSNNQSGDGLSFHERFYGPRGGDQSRTSNDGFRARSRSPS
KAVGVSNW
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtcggcgtccgcgccggcgtccaagggcccgcgatacgcgccgccagatccg
accctgcccaagccgtggagggcgctcatcgacggcaacactgggtacctctacttctgg
aacccggacaccaaggtcacccagtacgagcgccccgtcgcggctgtgcccgcctccccg
tcgcagccgcctggctactccaggcccgaggagagggcgaggagctccggaccttccgag
tcacgctcggaagctgcggtgagccgctcgcagtatgtgcccccttccgataacaggaca
aggaatgatcacgcagagccacgctctgcagctggagcgaatgtttcacagagtgctcag
ttcaccaatcaagtttctcaggctgccaatggaagccaaatgtcgacagaagcatatcgt
gctaagcatgagattactatcgttggcaacgaggcaccagcgcccttcatgacatttcaa
tccactggcttcccttcggagattctaagggaggtcatgcaagcaggattctctgcgcca
actcctatccaagctcagtcatggccaattgctctaaagggtcgtgatattgtagctgtg
gcgaagacaggttctggaaaaacactgggctatctcattccagggtttattcttctgaag
cgcctacagcataattcaagggaaggtccaacagtattagttttgtctccaaccagggaa
ttggcaacacaaattcaagatgaagcaatcaagtttggcaaatcttcaagaatatcttct
acgtgcttatatggaggtgctcctaaaggtcctcagctaagagagttggatcgtggtgct
gacgttgttgttgcaactcctgggagattgaacgacattttggaaatgaatagagtgagc
ctgcgtcaagtatcatatcttgtccttgatgaagctgaccgtatgcttgatatgggattt
gagccacaaataagaaaaattgtgaaacaaataccatctagacggcaaactcttatgtac
actgccacatggccaaaagaggtgagaaaaatagcgtcagatttactggttaacccaatt
caagttaacattgggaacactgatcagctggttgcaaataagtcaattactcagcacgtg
gaggttatctcacattcggagaaatcaagacgacttgatcagatcttgcgttcacaagag
cctgggtcgaaagttataatattttgctccaccaagaggatgtgtgatcagctggctcgg
aacttatcacgtcagtatggtgcttctgctattcatggtgataaatcacaggcggagagg
gattctgtgttgagtgacttccgaagtggcaggtgtcctgttcttgtagccacggatgtg
gccgctcgaggcttagacataaaggatatcagagtcgtggttaactatgatttcccaact
ggtgtggaggactatgtccacagaattggaaggacaggtagggcaggtgcaacaggatct
gccttcacattctttggtgaccaggactcaaagtatgcttcagaccttgtgaaaattttg
gagggggcagaccaatcagtgccaccacaattaaaagaaatggcttctcgtggaggatat
ggtggaagatcacgtcggtgggcatcttctgatgactcctatggtggtcagggatatggg
ggtagaagatcaacggacagcttcaataacagtagctttggcaatcaggctggtggtggt
tcaagctttcactcgagcttccataacagcacgagtggcggtcaatttggtgatactcct
agctttcatggcagcagccgcaacaatcagactggtgacaatccaagctttcctcccagc
tccagcaacaatcaatctggggatggtctcagctttcatgaaaggttctatggaccacgt
ggaggggatcaaagcagaacaagcaatgacggattccgtgctaggagcaggagtcctagc
aaggctgtgggagtttccaactggtaa
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