Setaria italica (foxtail millet): 101769864
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Entry
101769864 CDS
T02818
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase UPL4-like
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101769864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101769864
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101769864
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
HECT type E3
101769864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Arm
Motif
Other DBs
NCBI-GeneID:
101769864
NCBI-ProteinID:
XP_022680755
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All DBs
Position
III:2760701..2767927
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AA seq
1348 aa
AA seq
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MEVAEEAREAVLVYALAAIANEGAEAGETAAALAALCDVLALSGPDLIHGIPSAPLAKRL
PKLAAASAGGDDGDVPLLATRAMAEACEGAPVWAARFAHHGAVEALRDRLLAVNSIELAE
EVVGSRKAQRVYLCGFLWFCIVSSVRVCPMLTNCLWKCLQKVALQIISNIFSDYDEEYVS
TAMEAVPSLCNLLQSSDKTILKSAISCLALVAAGASENAEHMGKLSETNAVEATMSLMGN
EGWKSLSDDTLTGILGLLKNLASVSAKAVKSLFELDFCGLLKQMITYYSSSNCDNDKVKM
LLELIYQLMPPLGASEQHAKLVTAKKNVIMGQSAYMNQLASIVALTVQVAKCAALSSICY
RCVVVISNIVELSTPDFLMELQKTVNLSSFLTCLLARKNRHILFQTLKISRTLLEKCQQF
FLETFTKEGVKHSIDSIVSQEKNSSHQLKTKNNKESCLSFDLESSSTGEACRIENNAVMK
LGEEIKKRFFSVKGSKKSPHRFGFSLKSVRDFFARLHAATSPTENPDSCKQLSDLSRRLL
SDELPVTSTFEFVQSGSIKYLAIYLSNGAYCNTDLSDEQDVLGQLDEVQSRLQKFASLAL
TVSNESSANPLGILVEKLLDTLQMCYDSFPVMLSDEPSTRESMMIPLRYPETQEVTTLEL
KFRRSQREKELRNYNDVLSVDLFSTPDAIEPVLLPEVCKKTDQEPAPKNLNQEKEANGNS
KLDDGNRSSKLRFLYNGVILQPSATFFESILRLMNKGQSDLEIDPSFWDEEHYITYRKRN
RSKEISSQSSYNTQLSHVQENLQYTWLKDPFFTAILLGKLPGDLDGSDPSYNLLFMLKVL
EGLNRFSYQLLMDEQINKFAEGTLQDINDLKVAIYPVPQHQFISSLLTDKLELQMQDSLF
EDGLIPSWCVYLVETCPFLLSFNTRWKYFCLTAHRLFKTDQANSSTSDHFHGHADQVKSP
PQTKKYRVTRSAIIEGAVSMMTNHGPSSRIIEVEFEGEVGTGRGPTFEFYTTVSHELQRA
GLGMWRGDNREDGFIHASFGLFPKPWSSSSMQGIDFSNVLQKFKLLGHLVVRAVLDGRIL
DIPLSKAFYKIVLEQELDIYDIPSFDPELGKTLIEFQALVKRKKFMETSLRTSSPTAVLS
YXNVKLEDLCLDFTLPGSPEYELIPRGSQKMVTLDSLEEYVSLVVDATLKSGIAKQIEAF
KSGINEVFTLKALKMFTEEEMERILCGEQDAWALKNLEDHMEFEHGYDISSPSITTFLEI
LRELGREEQRAFIQFTTGAAQLPLGGLASLDPKLTVVRKQCDGNVDDELPSVNTCRHFIK
LPPYSSKEIMKKKLKYAITEGLGSFHLS
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggccgaggaggcgagggaggccgtgctggtctacgcgctggcggcgatcgcc
aacgagggcgcggaggcaggggagacggcggccgcgctcgccgcgctctgcgacgtgctc
gccctctcgggcccggacctcatccacggcatcccctccgcgccgctcgccaagcgcctc
ccgaagctcgccgccgcctccgccgggggcgacgacggcgacgtgccgctgctcgccacg
cgcgccatggccgaggcatgcgagggcgcgccggtgtgggccgcgcgcttcgcgcaccac
ggcgccgtcgaggcgctccgcgaccgcctgctcgccgtcaactccatcgagctcgccgag
gaggttgtgggctctcgcaaggcacaaagagtgtacctttgcggcttcctctggttctgc
attgttagttctgtccgtgtatgtcccatgctcaccaactgtttgtggaaatgcctacag
aaagtggctctccagatcatctcgaatatcttcagtgattatgatgaagagtatgtgtct
acagccatggaggctgtgccttctctgtgcaacctcctgcagtcttctgataagacgatt
ctcaaatccgctatttcttgcttggcattggttgctgctggcgcttccgaaaatgctgaa
cacatgggtaagctcagcgaaacgaatgctgttgaggcaacaatgagcttgatgggtaac
gagggttggaagagcctcagtgatgacaccttaactggcattcttgggctgcttaaaaat
cttgcctctgtctccgcaaaggccgtgaagtctctttttgagttggatttttgtggattg
ctcaagcagatgataacttactacagttcctcgaactgtgataatgataaggtgaagatg
cttctggagctcatttaccagcttatgccgcctcttggagcatctgagcaacatgctaaa
ctagtcactgcaaagaagaatgtcatcatgggacaaagtgcatacatgaaccagcttgcc
agcattgttgccctcacagtacaggttgcaaaatgtgctgcgctatcatcaatttgctac
agatgtgttgttgtaatcagcaacattgttgaattaagcacacctgatttccttatggag
ttacagaagactgtaaatctgtcaagctttcttacttgtttgttggcccggaaaaatcgc
catatcctattccaaacactcaagatttcaaggaccctcctggaaaaatgccaacagttt
ttcctcgagacctttaccaaggagggtgtaaagcattcgattgattccatagtatcacaa
gaaaaaaactctagtcaccagttgaaaacaaagaataacaaagaaagttgcctttccttt
gacctggagtcttcctcgactggtgaggcatgtaggattgagaacaatgctgtcatgaaa
ctaggagaagagataaagaaacgcttcttctcggtgaaaggaagtaaaaaatctccacat
aggtttggattttctcttaaaagtgtcagggacttttttgctaggttgcatgctgcaaca
tccccaactgaaaatccagatagctgcaagcaattatctgatctttcaaggagattattg
tcagatgaactgccagttacttctacttttgagtttgtacagagtggatcgataaaatat
ctggcaatttatctctcaaatggggcatactgcaatacggatctcagtgatgaacaggat
gtactaggacagcttgatgaggtgcagagtcggctgcagaaatttgcttctttggctctc
actgtctccaatgaaagctcagcaaatccccttgggattttggtggagaagctactagac
accttgcagatgtgctatgacagttttcccgtaatgctctctgatgaaccgagtacacgt
gagagcatgatgattcccctgagatatcctgagacccaggaagtaacgacattggaatta
aaatttcggaggtcacagagggagaaggaattgcgcaactacaatgatgttctcagtgtt
gatcttttctcaacacctgatgccatcgaaccagttctactccctgaagtttgtaaaaaa
accgatcaggaacctgcacccaagaacttgaatcaggagaaggaagcaaatggtaacagc
aaattagatgacgggaacagatcctcaaaactgagattcttgtacaatggtgtgatactc
caaccatctgctactttttttgagtctatccttcgtctgatgaacaaggggcaatctgat
ctcgagattgacccatctttctgggatgaagaacactatataacctataggaagagaaac
agaagcaaagaaatctcttctcagagttcctataatactcagctatcccacgtgcaagaa
aaccttcagtacacatggttaaaggacccgtttttcactgccatacttcttggcaaactt
cctggtgatctggatgggtccgatccatcgtacaatctcttgttcatgctgaaagttctt
gaagggctgaaccgtttttcatatcaactgttgatggatgaacagataaacaaatttgct
gaaggaactctacaagatatcaatgatcttaaggtggcaatttatccagtcccacagcat
cagttcatcagcagccttttgacggataagctagagctgcaaatgcaagatagcttgttt
gaggatggcctcataccctcgtggtgtgtctatcttgttgagacctgcccgttcctattg
tccttcaacacacggtggaagtacttttgcctgactgcacatcgcttgttcaagactgac
caggctaacagctctacttcagaccattttcatggtcacgcagaccaggttaagagtcct
ccacagactaaaaagtatagagtgacccgaagcgcaatcattgaaggcgctgtatcaatg
atgaccaatcatggtccaagcagcagaattattgaggtagaattcgaaggagaggttggg
actgggcgaggtccaacattcgaattctacactacagttagccatgaacttcaaagagcc
gggcttggaatgtggagaggagacaaccgtgaagatggattcattcatgcctcttttgga
ctatttccaaagccgtggtcgtcatcaagcatgcaagggattgatttttctaatgtgcta
cagaaattcaagcttcttgggcatcttgttgtgagagcagtcctggatggaaggatcctg
gacattccactttctaaagcattttacaagatcgtgcttgagcaggagctcgatatatat
gacatcccatcgtttgatcctgagctgggcaagacattaatagagtttcaagcacttgtt
aagcggaagaaatttatggaaacatctttaagaacatctagccctactgctgttttgtcc
tacnaaaacgtgaaattggaggatttgtgccttgacttcactcttcctggaagtcctgaa
tatgaacttattcctagaggctcccagaagatggtgacacttgacagtttagaggaatat
gtgtcattggttgttgatgcaacactgaagagcgggattgccaagcagatagaggctttc
aaatctggaattaacgaggtttttacccttaaggccctcaaaatgtttactgaagaggaa
atggaacgcatactatgtggtgaacaggatgcttgggctttaaagaaccttgaggatcac
atggagtttgagcatggctatgacattagcagtccatcgattactactttcctggagata
ttgcgggagcttggaagagaggagcagcgggctttcatacaattcactactggagcagct
caactcccacttggcggcctagcttcacttgatcccaagctcactgtcgtgcgcaagcaa
tgtgatggcaatgtagatgacgaattgccaagtgtcaatacctgccggcactttatcaag
ctccctccttactcgtccaaggagataatgaaaaagaaactcaaatatgcaattacagag
ggtttaggctccttccacttgtcatga
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