Setaria italica (foxtail millet): 101770131
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Entry
101770131 CDS
T02818
Name
(RefSeq) U3 small nucleolar RNA-associated protein 4 homolog
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101770131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101770131
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101770131
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WDR55
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_Gbeta
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
Beta-prop_SPT8
EIF3I
WD40_MABP1-WDR62_2nd
Pep3_Vps18
Beta-prop_NUP159_NUP214
Beta-prop_WDR41
Beta-prop_ACSF4
Beta-prop_SCAP
Beta-prop_IFT122_1st
NBCH_WD40
Salp15
Motif
Other DBs
NCBI-GeneID:
101770131
NCBI-ProteinID:
XP_004981864
UniProt:
K4A5Y0
LinkDB
All DBs
Position
IX:complement(6221076..6225964)
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AA seq
815 aa
AA seq
DB search
MDKLRVHRCGGGAVEWSPSPVVALATSPCASQVAAAREDGSLELWLVSPGSVGWHHQLTI
QGNAESRVTSLVWGRSGVGAAGRLLSSSVDGSVVEWDLFHLQQKTVLDTAGGPLWQMAIE
PSDDSKNTEINGSGIAINGHANNNDSSDSDLSNVDDGDDSEDEDSPANTRSSYHVNKLQR
LALACDDGSVRLYNVPESGALTYYRSLPRVSGRTLSVTWSSNAKFIFSGSSDGLIRCWDS
TSFQEKYRITAGLGGAGTGSELCIWTLLFLRCGTLVSGDSTGSVQFWDSSHGTLLQAHSY
HKGDVNALATLPSQNRVFSAGSDGQVILYKVSKDDSGTSKNAVKEQVRKWVYVGYVRAHT
HDVRALTMAVPICREDELSEEKAVKIRRREKRQFSYHKWAHLGVPMLISGGDDTKLFAYS
AREFTQFAPHNFCPAPQRPLINLARDSTVNGDSVMLVQSANWLDVLLVTVQNKLTPSTSS
REDAKVRQLARLKSKGSRKIISSAASTNGTLLAYSDCVRPCLFALKHKSGKKYTLDKLEL
PKGLPCSQSMMFTVDSSNLILAGRDGKIYVIDIETREISNVFHPTRKADATKVSSRESPV
TKMFLSVDGQWLAAVNCFGDIYVFNLEVQRQHWFISRMNGGSVTSGGFCPKNNALVITTS
KNEVYVFDVEAKQLGEWSKRYTHHLPRSFQEFPGEVIGLSFPPQSSSIVVVYSTRAMCLI
DFGLPVIEDVQLPNRSTGPAEKTDAQKGTKIKQKRKAHNEELKQENKNNFNFFAFKEPVL
FVGHLLDGSILVVEKRWMDVVEGFGAPVHRHIYGT
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggacaagctccgcgtccaccgctgcggcggcggcgcggtcgagtggtcgccgtccccc
gtcgtcgcacttgccacctctccctgcgcgtcccaggtcgccgccgcgcgcgaggacgga
tcgctcgagctctggctcgtctccccgggctccgtcggctggcaccaccagctcacgata
caggggaacgccgagtcgagggtcacatcgctggtgtgggggcggagtggagttggagcg
gccggccggctgctctcatccagcgttgatgggtcggtggtcgagtgggatctcttccac
ctgcagcaaaagactgtcctagatactgctggaggaccactctggcagatggccatcgag
ccgtccgatgattctaaaaataccgaaattaatggctcaggaattgccatcaatggccat
gcaaataataacgactcaagcgactctgacttaagtaatgttgatgatggcgacgactct
gaggatgaggacagtccagccaacacgagatcttcataccatgtcaataaactccaacga
ctggcacttgcctgcgatgatggttctgtaagattgtataatgtgcctgaatcaggcgca
ttgacttactatagatctcttccaagagtaagcgggcgaactctgagtgtgacgtggagt
agtaacgccaaatttatattttctggaagcagtgatggtttaatcagatgctgggattca
acatctttccaagaaaagtatcgtattactgctggattgggaggggctggtaccggatcg
gaactatgtatctggacattattgtttctgaggtgtggaacacttgttagcggagatagt
accgggagtgtacagttttgggatagcagccatgggacacttttacaagctcactcttat
cataaaggcgacgtaaatgcactagcaactctgcctagtcagaacagggtattttccgca
gggtctgatgggcaggtaattctttacaaagtatcaaaagatgattccggcactagtaaa
aacgcggtcaaagagcaagttcgcaagtgggtctatgtgggatacgtaagagctcacact
catgatgtaagggcattgaccatggctgtaccaatctgtagagaagacgaattatcggag
gaaaaggcggttaagattcgccggcgtgaaaagcgtcaattcagttaccacaaatgggct
catcttggtgttccaatgctaatatctggtggtgatgacactaagctgtttgcttattcg
gcaagagagtttactcaatttgcaccacataatttctgccctgcacctcaacgtcctttg
ataaatcttgctcgagatagcacagtcaatggagattcagtaatgcttgtccaatctgcc
aactggctggatgttttacttgtgacagttcagaacaagttaactccaagtacatcatct
agagaagatgctaaagtgcgacaacttgctcgtttgaaaagcaaggggtcaagaaaaatc
atctctagtgctgcctccacaaatggaacgcttttggcctattcagattgtgtgaggccc
tgcctgtttgcactaaagcataagagtggaaagaagtacacccttgacaaattggagctg
ccgaaaggactgccctgttctcagagtatgatgtttacagttgactcgtccaatttgata
ctagctggacgtgatggaaaaatatatgtcattgatattgaaacaagagaaatttcaaat
gtatttcatcctacaagaaaggcagatgcaacaaaagtctcttcaagagaatcacctgta
acaaaaatgttcctaagtgtggatgggcaatggttggctgcagtaaactgctttggggat
atttatgtatttaatcttgaagtacaaaggcaacactggttcatatctagaatgaatggt
ggctctgttacatctggcggtttttgccccaagaacaatgctcttgtgataactacatcg
aaaaatgaggtatatgtatttgatgtggaagcaaaacagttaggtgaatggtccaagcga
tacacacatcacttgcccagaagtttccaggaatttcctggtgaggtcattggcctatca
tttccgccacaaagctcatcgatagttgtggtatacagtacaagggcaatgtgcttgatt
gattttggattgcctgttattgaggatgttcaattgccaaatagatcaaccggaccagca
gagaagacagacgcacagaagggtacaaaaataaagcagaagcgcaaggcccataatgaa
gagttgaaacaagagaataagaataacttcaacttctttgcgtttaaagagccagtcctg
tttgttgggcacctattggacggttcaattttagtagtggagaagcggtggatggatgtg
gttgaaggatttggcgcacctgttcacagacatatatacgggacatga
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