Setaria italica (foxtail millet): 101770540
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Entry
101770540 CDS
T02818
Name
(RefSeq) ubiquitin domain-containing protein DSK2b
KO
K04523
ubiquilin
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
101770540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101770540
03051 Proteasome [BR:
sita03051
]
101770540
Membrane trafficking [BR:
sita04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
101770540
Proteasome [BR:
sita03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
101770540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
TSP9
UBA_7
Rad60-SLD_2
Dsc3_N
TSC22
Motif
Other DBs
NCBI-GeneID:
101770540
NCBI-ProteinID:
XP_004983789
UniProt:
K4A7N5
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All DBs
Position
IX:40002010..40006736
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AA seq
575 aa
AA seq
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MASGGEGAGSGESPPAAAGEAASAGATLNIRCANGSKFTVRADLAATVGAFKEVVAGSCD
VPAPQQRLIYKGRILKDEQTLESYGVETDHTIHLVRGVAPSAASGAPAAAAAAAAASPLA
SSTPSSGPAGGLGGLFPGVGAPRSGRPSGIFGPGFPELEQVEQHLSQNPNLMREIMNMPA
MQNLMNNPDLIRNMIMNNPQLREIMDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRN
TDRAMSNIESSPEGFNMLRRMYETVQEPFLNATTMGGEGNTASNPFAALLGNQGSNQPGQ
PATNAPTPGSESTTGTPAPNTNPLPNPWSSNAGSAQGAARSGPTGNARTGATGGLGGLGS
PDLSSLLSGLAGNPRSGAAGGLGGLGSPDLGSMLGGVPDASFLNQMLQNPAMMQMMQSLM
SDPQTMNQLLNFNPNARNLMESNTQLREMFQNPEFLRQLTSPETLQQLLSFQQTLLGQLG
QNQSSQDGNNSGSATGTRGNPSLDTLMSMLSGLGSGGGLGVPNNSNVPPEELYATQLTQL
REMGFIDNAENIQALVATAGNVHAAVERLLGNLGQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcggaggcgaaggcgccgggagcggcgagtccccgcctgctgccgcgggggag
gcggcatcggcgggggcgacgctgaacatccggtgcgccaacggctccaagttcacggtg
cgggccgacctggccgccacggtgggcgcgttcaaggaggtcgtggccgggagctgcgac
gtgccggcgccgcagcagcgcctgatctacaagggccgcatcctcaaggacgagcaaacc
ctagaaagctacggtgttgagacagatcacacaattcacttggtgcgtggtgtcgcccca
tcggctgcatcaggtgcacctgctgctgctgctgctgctgctgctgccagtccccttgct
tcatctactcctagcagtggtccagcaggtggcctgggaggcctatttccgggcgttggt
gctccaagaagtggcaggccatcaggtatatttgggccaggatttccagaactagagcaa
gttgagcagcatttaagccagaatcccaacttgatgagggagataatgaacatgccagca
atgcaaaatctcatgaacaacccagatttaatacgtaatatgatcatgaacaacccgcaa
ttgcgcgagatcatggatcggaatccagatcttgcccatgtgctcaatgacccaagtgtt
ctccgacaaactctcgaagctgctaggaaccctgaaatcatgagagagatgatgcggaac
acagacagagctatgagcaacattgaatcttctcctgaagggtttaatatgctccgacgg
atgtatgaaactgtgcaggagcctttcctgaatgcaaccacaatgggcggagaaggcaac
acagcctcaaacccatttgcagctcttcttggcaatcaggggtctaaccaacctggtcaa
cctgcaacaaatgctccaactcccggttctgagtccacaacaggaacccctgctccaaat
accaatccacttccaaatccctggagcagcaatgctgggagtgcacaaggagcagcacgg
tccggtcctactgggaatgcaagaactggtgccactggtggcctgggagggttgggttca
ccagatttgagtagcttgctcagtggtcttgctggcaatccaagatctggtgccgctggt
ggcctaggagggttgggatcaccagacctggggagtatgcttggcggtgtacctgatgct
tcttttctgaatcagatgttgcaaaaccccgcaatgatgcagatgatgcagagccttatg
tctgacccacagaccatgaaccagttgcttaacttcaacccgaatgcacgaaacctgatg
gaatcaaacactcagctgagggaaatgtttcaaaatccggaatttcttcgccagttgaca
tctccagagactttgcagcaattactctcatttcagcagactttattaggacagcttggt
caaaatcaatctagccaggatggcaacaattcaggcagtgcgacaggtacgcgaggaaac
cctagccttgacaccttgatgagcatgctcagcgggcttggatcaggtggcggcctaggt
gttccaaataattccaatgtgccaccagaggagctttatgcaacacagcttactcagctc
cgagaaatgggtttcattgacaatgcggagaacatccaagcactggttgctactgcaggg
aatgtacatgctgcggtggagcgcctccttgggaatcttggccagtag
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