Setaria italica (foxtail millet): 101770654
Help
Entry
101770654 CDS
T02818
Name
(RefSeq) E3 ubiquitin-protein ligase UPL4
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101770654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101770654
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101770654
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
HECT type E3
101770654
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HEAT_EZ
Arm
Adaptin_N
HEAT_2
Htt_N-HEAT_1
HEAT
TrAA12
Motif
Other DBs
NCBI-GeneID:
101770654
NCBI-ProteinID:
XP_004963722
UniProt:
K3Z348
LinkDB
All DBs
Position
III:17291585..17301462
Genome browser
AA seq
1533 aa
AA seq
DB search
MDRCRKRPDSDPEGSGEPEPPADKRPCTAEPSTSAAAAAAPPPRAEQGGSDMDTSSSGHA
GDADADADDGDGDGDGDGDGDGGSSCESDGDGSPRPRGARAGRFHQMVEAVAAEGAGQDA
LVAALTELCKELSFCAEDAGGYFPTEAAARALVRRAGGGADGDGAEAAPDVVLLSVRAIT
YLCDAMPRAADSVVRHGLLPLLCSRLLAIEYLDVAEQCLQAFEKISRRQPTQCLQAGMIT
AVLTYIDFFTASIQRVAVSAVANACKKVPADCSHFVVDSVPTLCNLLQSEDKMVVEKVAA
CLISIVDSFSSSIDLLDQLCHQGIIEKVLPLIHTGGLTALSPSTCSNLIGLLAKLACSSL
VAVKSLFELNVGSTIKGILVTSDLSHGMPYLPLEKQNNQVYEALKLANQLIPSAARDVED
TQIILAKEKIITDEPRFLCQFSRDILPVLIKAVNSGANSYICYGCASIVNNICYFSKPET
LQELLKETNISSFLAGLLSRKDHHVLTSSLKIIEILMQKLPDAYLGSFIKEGVVYAVEAL
LTQEDCSKSTRLLDDMQQSGTQPVIRNKSKCFCYAFDAHRSEAAETRACRIGNDSLFTFA
RHVKSTYFTKEVVSSEIGVTEILQKLKTCCAVLNETADKSSEQDNLQNEEYLSTILSEVM
MELHGGETMTTFEFLESGLVKSLSNYLSNGKYLQAEENMSCSSDHFLAVVKRFQSFARMS
FSRMGQNWSDMLLTLLVRKLQNALTSLDNFPVIMSHNFKPRSNISDIPTRHSTIIPCIRV
RFKKDEDETNLSSYDSIVNVEILSSLHTIEEFLWPKVSTDMNSQKVESPPSGTALESKYA
SDDSQERDSTPQSSPPSEGLMTCGNQNPAVEPCPKEGTSSSGQADKSTTIVSDHALQPKL
VFSLKGKELDRSVTLYQSVLQDQINAGSDIILDMQFWRNVHDIIFRTAANPEANRTAINP
EADSLKGTTAISSENDSTTGFKWQMLPFFSSMLLGKLPCKLDRSNPLYDILFMLHILEGL
NRYSFHLVSDERTHSFAHGKITNLDDLKAVVFSIPHQEFVSAKLTDKLEQQMHDPLVSRS
SCLPLWCTELMSACPFLFSFEARWKYFQLTAFGSLKNHHGHIMDAIVNTVTERGPSHSRK
KFKVDRDNILVSAAKMMKSYAKSNALLEVEYKEEVGTGLGPTMEFYTLISHEFQKSGLGM
WRGELPCEAGTDDAHVSRFVVAPKGLFPRPWSTSADCASFQEVSKQFHLLGQVVAKAIKD
GRILDIPFSKAFYKLILGQELNIYDIQLFDSELAISLMEFQAIACRRKYAESNLTRDCQI
MSDLTYRGCRIEDLAIDFALPGYPDYMLSSGSSSDSLNVENLEEYVHHVVEATVKSGIAR
QMEAFKSGFNEVFPLNKLEVFSEDELERLLCGEQDTWDFGKLVDHIKFDHGYTSSSPPVI
NLLEIVQEFGSHQRRAFLQFITGSPRLPPGGLAALNPKFTVVRKHNSNDADNDLPSVMTC
ANYLKLPPYSSKEKMREKLIYAITEGQGSFHLS
NT seq
4602 nt
NT seq
+upstream
nt +downstream
nt
atggatcgctgccggaagcggcccgactccgaccccgagggctccggggagcccgagccc
cccgccgataagcggccctgcacggcggaaccctcgacctccgcggccgcggccgcggct
cctcccccgcgggcggagcagggcggctcggatatggacacctcgtcgtccggccacgcc
ggcgacgctgatgcagacgcggatgacggggacggcgatggcgatggggatggggacggg
gacggcgggtcgtcgtgcgagtcggatggggacgggagcccgaggccgcgcggcgcgcgg
gccgggaggttccatcagatggtggaggcggtggcggcggagggcgcggggcaggacgcg
ctcgtggcggcgctgacggagctctgcaaggagctctcgttctgcgccgaggacgcgggg
ggctacttccccacggaggcggccgcgcgggcgctggtgcggcgggccggcggtggcgcc
gacggcgatggtgcggaggctgcccccgacgtggttctgctctccgtgcgcgccatcacg
tacctctgcgatgccatgccgcgcgccgcagactctgtcgtccgccacggcctcctcccc
ttgctctgctctcggctccttgccatcgagtaccttgatgtcgctgagcagtgcttgcaa
gcatttgagaagatatcacggcggcagcctacccagtgcttgcaggcaggcatgatcacc
gctgtgctgacatacattgacttcttcactgcaagtattcagagggttgcagtgtcagct
gtcgcaaatgcctgcaaaaaggtccctgcagattgctcccattttgttgtggattcagtc
ccaacactgtgtaatcttctgcaatccgaggacaagatggtagtggagaaggttgcagct
tgcttgataagcatcgtggactcttttagcagttcaattgatcttcttgaccagctctgt
caccagggcatcatagagaaggtcctacctttgatccacactggtggactcacggccctt
agcccatcgacttgcagcaacctgattgggcttcttgccaagctagcctgttcgtcactt
gtggcagtgaagtctctctttgagctgaatgttgggagcacaataaaggggattttggtc
acttcagacctatctcatggcatgccatacttacctttggaaaaacaaaacaatcaggta
tatgaagctctgaaactagcaaaccagttgattccttctgctgcaagagacgttgaagac
acccagatcatacttgcgaaagaaaaaattattacggatgaaccaaggttcctgtgtcag
ttctctagggatattcttcctgtcttgatcaaggcggtgaactctggtgccaattcgtac
atttgctatggctgtgcttcaatagtgaacaacatttgttacttcagtaaaccagaaacg
cttcaagagttgctcaaagaaacgaacatatcaagcttcttggctggtttattgtctaga
aaggatcatcatgtcctgacctcatcactaaagataatcgagattcttatgcaaaagctt
cctgatgcttacctgggatcctttatcaaggaaggtgtagtttatgcagttgaggctctt
cttacacaagaggattgctcaaaatccactcgtctgcttgatgacatgcaacaatcaggg
actcaacctgtcataagaaataaatctaaatgtttctgctatgcatttgatgcccacaga
tctgaagctgctgaaacaagggcttgtaggattgggaatgacagtctttttacttttgca
aggcatgtgaagtcaacctacttcactaaggaagtagtgagttctgagataggggtaact
gagattttgcagaaactcaaaacttgctgcgcagttttaaacgagaccgcagacaagtca
tcagaacaagataatcttcaaaatgaagaatacttatctaccattttaagtgaggtgatg
atggagcttcatgggggagaaacaatgacaacctttgaattccttgagagcggattagtc
aaatctttatcaaattacctctcgaatggcaagtacctccaggcggaggaaaatatgagt
tgcagctctgaccattttttggctgtggtgaaaagatttcaatcatttgctcggatgtca
ttctcaagaatgggccaaaattggagtgatatgctcttgacactgttagtaaggaagcta
cagaatgctcttacttctcttgacaactttccagtgataatgagccacaatttcaagcca
aggagcaatatttctgatatccctacgaggcactcaacaattattccatgtatccgagta
cgattcaagaaagatgaagatgaaactaacttgtcaagctatgatagtattgtgaatgtg
gaaatattatcatccttgcatactattgaggaatttttatggcccaaagttagtacagat
atgaacagtcagaaggttgaatcaccacctagtggcactgctttggaaagcaaatatgct
agtgatgactctcaggaacgagattccacaccacaatcatctcctccatcagagggcctg
atgacttgcggaaatcaaaatccagctgtagaaccatgcccaaaggaaggaacttcatct
tctggtcaagcagataaaagcacaacaattgtgagcgatcacgccttacaaccaaaattg
gtatttagcttaaaagggaaagagcttgaccgatctgttactctgtatcaatcagtcttg
caggatcagatcaatgcagggtctgacataattctggacatgcagttttggcgcaatgta
catgacataattttcagaacagctgctaacccagaggctaatagaacagccattaaccca
gaggcagattctcttaaagggactactgcaatatcttcagaaaatgacagcacaactggg
tttaaatggcagatgctcccatttttttctagtatgttgcttggtaaacttccttgcaaa
cttgacaggtcaaatccattatatgacatattgtttatgttacacattttagagggatta
aaccggtattccttccacctcgtctctgatgagagaacccattcttttgcccatggaaag
ataactaaccttgatgatctgaaggcagtagttttctcgattcctcatcaggagtttgtc
agtgccaaactgacagataaactggagcaacaaatgcatgatccattggtttctaggtct
agctgcctgcctttatggtgcactgaactgatgtctgcatgccctttcttgttttcgttt
gaggcaagatggaagtatttccaactaacagcatttggctctttgaaaaaccatcatgga
catattatggatgcaattgttaatactgtgacagaaaggggaccttcccactcgcgtaaa
aagttcaaagttgatcgcgataatatactggtctcagctgctaaaatgatgaagtcgtat
gctaagagcaatgctctacttgaagtagaatataaagaggaagtgggtactggtttaggt
cctacaatggaattctatacattgataagtcatgaatttcagaagtccggtctaggcatg
tggagaggggagcttccttgtgaagctggtactgatgatgctcatgtttctagattcgtg
gttgcgcctaaaggactgtttcctagaccttggtctacttccgcagactgtgcttccttt
caagaagtaagcaaacaattccacctacttggtcaggttgttgcaaaagcaattaaagat
ggcagaattctcgacattccattttctaaagcattctacaagcttatccttggacaggag
cttaatatatatgatatccagttatttgattctgaactggcaatatcccttatggagttt
caagcgattgcttgtcggagaaaatatgcagagtcaaatttgacaagggactgccagatt
atgtctgatttgacttatcgaggttgtagaatagaggatcttgctattgattttgctctc
ccaggatatccagactatatgctctcatcaggaagcagctctgatagtttgaacgttgag
aatttggaagaatatgttcatcatgttgtcgaggcaacagttaaaagtggcattgcaagg
cagatggaagcttttaagtcaggatttaatgaggtatttccactaaacaaactcgaggtt
ttctcagaggatgagctagagcgattactctgtggtgaacaagatacttgggattttggg
aaacttgtggatcacatcaaatttgatcatggttacacttccagcagccctcctgtcatt
aatttgctggaaatcgtccaagagtttggatcccatcaacgcagagctttcttgcaattt
ataacaggttcacctcggcttcccccaggtggcttggccgcactaaatccgaagttcacg
gttgtccgaaagcataacagcaatgatgctgacaatgacctgccgagcgtgatgacctgt
gccaactatcttaagttacctccatactcttcaaaggaaaagatgagggagaaactcatc
tacgcgatcacggaaggccagggttccttccacctatcctaa
DBGET
integrated database retrieval system
