Setaria italica (foxtail millet): 101771026
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Entry
101771026 CDS
T02818
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03030
DNA replication
sita03410
Base excision repair
sita03420
Nucleotide excision repair
sita03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101771026
03410 Base excision repair
101771026
03420 Nucleotide excision repair
101771026
03430 Mismatch repair
101771026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sita03032
]
101771026
03036 Chromosome and associated proteins [BR:
sita03036
]
101771026
03400 DNA repair and recombination proteins [BR:
sita03400
]
101771026
DNA replication proteins [BR:
sita03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
101771026
DNA Replication Termination Factors
ELG1-RFC complex
101771026
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
101771026
DNA repair and recombination proteins [BR:
sita03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
101771026
Check point factors
HRAD17(Rad24)-RFC complex
101771026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
Mg_chelatase
AAA_16
Rad17
Viral_helicase1
RCF1-5-like_lid
AAA_5
nSTAND3
AAA_11
RuvB_N
AAA_28
AAA_19
AAA_assoc_2
AAA_24
AAA_25
AAA_30
MeaB
RNA_helicase
AAA_3
ABC_tran
DUF6120
DNAX_ATPase_lid
IstB_IS21
bpMoxR
NTPase_1
NPHP3_N
AAA_18
SLFN-g3_helicase
KTI12
DO-GTPase1
DNA_pol3_gamma3
DNA_pol3_delta_C
Motif
Other DBs
NCBI-GeneID:
101771026
NCBI-ProteinID:
XP_004976529
UniProt:
K3Y8K6
LinkDB
All DBs
Position
VII:27545564..27549097
Genome browser
AA seq
336 aa
AA seq
DB search
MAASSSAAAPAPADTYDIPWVEKYRPTRVADVVGNSDAVARLEVIARDGNMPNLILSGPP
GTGKTTSILALAHELLGPSYREAVLELNASDDRGLDVVRNKIKMFAQKKVTLQPGRHKIV
ILDEADSMTSGAQQALRRTMEIYSNTTRFALACNTSSKIIEPIQSRCAIVRFSRLSDQEI
LGRLMIVVAAEKVPYVPDGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQP
HPLHVKNMVKNVLDGKFDEACSALKQLYDLGYSPTDIITTLFRVVKNYDMAEYLKLEMLK
ETGFAHMRICDGVGSFLQLSGLLAKFALVRETAKAP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggccgcctcctcttccgccgccgctcccgcccccgccgacacctacgacatcccatgg
gtggagaagtaccgccccacccgcgtggcggacgtcgtcggcaactccgacgccgtcgcc
cgcctagaggtcatcgcccgcgacggcaacatgccaaacctcatcctctcggggcctccg
gggactgggaagacgacgagcatcctggctttggcccacgagctgctcgggcccagctac
cgcgaggccgtgctcgagctcaacgcctcagacgacagggggctggatgtggttcggaac
aagatcaagatgtttgcacagaagaaggtcactctgcagcctgggcggcacaagatcgtg
atcttggatgaggctgacagcatgacatcaggagcacagcaagctctgcggcgaacaatg
gagatctattccaacaccactagatttgcacttgcatgcaacacctcatctaagataatt
gaacccattcaaagccgctgtgctattgtcaggttctcgaggctctctgaccaggagatc
cttggccgcctaatgattgttgtggcagctgagaaggttccttatgtgccagatgggctt
gaagctatcatatttactgctgatggtgacatgagacaagctctgaacaacctgcaagct
acatttagtgggttccgctttgttaatcaagaaaatgtgttcaaggtatgcgaccaacca
catcccttgcatgtcaagaacatggtgaaaaatgtgcttgatggaaagtttgatgaggcc
tgctctgcactgaagcaactttatgatttgggatactctcctactgacattattactact
ctcttccgtgttgtcaagaactatgacatggctgaatatctgaagctggaaatgctgaag
gaaactggatttgcacacatgagaatctgcgatggtgttgggtcattccttcagctttct
ggccttctggccaagtttgctctggtgagggaaactgcaaaagcaccctga
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