KEGG   Setaria italica (foxtail millet): 101771109
Entry
101771109         CDS       T02818                                 
Name
(RefSeq) syntaxin-52
  KO
K08503  syntaxin of plants SYP5
Organism
sita  Setaria italica (foxtail millet)
Pathway
sita04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:sita00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    101771109
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sita04131]
    101771109
Membrane trafficking [BR:sita04131]
 SNARE
  SNAP-25[C] (Qc)
   STX8
    101771109
SSDB
Motif
Pfam: SNARE SPAM CC4_CEP85 DUF948 Ferritin NPV_P10 Use1 XhlA Tai4 Sec20 RmuC LIF_OSM DUF2721 LUC7
Other DBs
NCBI-GeneID: 101771109
NCBI-ProteinID: XP_004987204
LinkDB
Position
IX:57677415..57678912
AA seq 252 aa
MARPMLPITNPHGGDARSSSSALDQWTKRFQEAERLVDDVVERIAERDSVPPSLPRKLQR
RTAEIRRKVTILGTRLDMLQEDLSDLPKKQNISLKQLNKLAEKLSGLSSKAKEVGGQFTM
NHSSDGNDLCGSSEKSTKIDVNSIADMDNRDMVNLQRKVMKEQDSQLEILEETVVSTKHI
ALAINEELDLQTRLIDDLDESVEDTSTQLQRAVRRLKKLSTRMRKDGSCWGIVLAVIAAV
ICVAVVWALITT
NT seq 759 nt   +upstreamnt  +downstreamnt
atggcgcgtccgatgcttccgatcacaaacccgcacggaggcgatgctcgatcgtcgtct
tccgcgctggaccagtggacgaagcggttccaggaagccgagcggctggtggacgacgtc
gtcgagcggatcgccgagagggactccgtgccgccgtcgctgccgcgaaagctgcagcgc
cggacagccgagatccgccgcaaggtcaccattctcgggaccaggctcgacatgctgcag
gaggacctgtccgatctcccaaagaagcaaaacataagcttgaaacagctgaacaagcta
gccgagaagctctccggtctgagctccaaggcgaaggaggttggcggtcagttcacgatg
aatcactcatcggacgggaatgacttgtgtggatcgagcgagaagagcacaaagatagat
gtgaacagcattgccgacatggacaaccgagacatggtcaacttgcagaggaaggtcatg
aaagagcaagattctcaactggagattctggaggagaccgttgtcagcacgaagcacatt
gcgttagcgatcaacgaggagctggatctgcaaactaggctgattgacgacttggacgag
agcgttgaagacacaagcacccaattacagcgtgccgtgaggaggctgaaaaaactgagc
acgcgcatgaggaaagacggttcttgttggggcatagtcttggcggtcattgccgctgta
atctgtgttgccgtagtctgggctctgataacaacctag

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