Setaria italica (foxtail millet): 101771443
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Entry
101771443 CDS
T02818
Name
(RefSeq) oligouridylate-binding protein 1B
KO
K13201
nucleolysin TIA-1/TIAR
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101771443
03041 Spliceosome [BR:
sita03041
]
101771443
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101771443
Spliceosome [BR:
sita03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101771443
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_5
RRM_8
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
101771443
NCBI-ProteinID:
XP_012703817
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All DBs
Position
VIII:complement(34505971..>34511876)
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AA seq
441 aa
AA seq
DB search
SRRRRRRRAAAQQQQAADAAGAAPAAAAAAAAAALVPRGNTRTPGLLAAPQIEPIVSGNL
PPGFDSSTCRSVYVGNIHLQVTDAVLQEVFQSIGPVEGCKLIRKEKSSFGFIDYYDRRSA
ALAIMSLNGRQLYGQPIKVNWAYTSTQREDTSGHFNIFVGDLCPEITDAALFAFFSGYST
CSDARVMWDQKTGRSRGFGFVSFRNQQDAQNAINDLNGKWLGNRQIRCNWATKGANAGEE
KQSVDTKVDQTNGSSEAGQENPNEVGPENNPLFTTVYVGGLPHEASNNDVHLFFHSLGAG
LIEEVRVTRDKGFGFVRYSTHEEAALAIQMGNGQLIGGRPIRCSWGNKPTPPGTASSPLP
PPAPSPFLGGVSATDFLAYQRLALSKIAANPALMGQHALKQATLGMDTGASQAIYDGGFQ
GINAATAAAQQQQQQQQLMYF
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
agcaggcggcggcggcggcggcgggccgcggcgcagcagcagcaagcagctgatgcagca
ggcgctgctcctgcagcagcagcagcagcagccgcagccgcccttgttccccggggcaac
acccgcacccccggcctcctcgccgcgccgcagatagagcccatagttagcggaaacctt
cctcctgggtttgattcaagcacatgccgcagcgtgtatgttggcaatatccatcttcaa
gtgacggacgcagtactgcaggaagtcttccaaagtattggtccagtagaaggttgcaag
ctcatcagaaaagaaaagtcatcttttggtttcattgactactatgaccgccgatctgct
gcactagcaattatgtctctcaatggcagacagctgtatggtcagccaataaaagtcaat
tgggcatatacaagtactcagagggaggatacatcaggccattttaatatttttgttggg
gacctttgccctgaaatcactgatgccgccttgtttgcgtttttctctggatactctacc
tgctcagatgctagggttatgtgggaccagaaaacaggacgatccagagggtttggtttt
gtttctttcaggaaccagcaggatgctcaaaatgcgataaatgatttgaacggtaagtgg
cttggcaaccgccaaattcgttgcaattgggcaacgaaaggcgctaatgctggtgaagag
aaacaaagtgtggacactaaagtggaccagaccaatggttcatcagaagctggacaggag
aatccaaatgaagttggtcctgaaaacaacccactctttaccactgtttatgttggtggt
cttcctcatgaggccagcaacaatgatgttcacctgttttttcattcacttggggctggc
ttaattgaggaggtccgtgtaacgcgtgacaagggctttggctttgtgaggtacagcacc
catgaggaagcggcactggcaattcagatgggcaatggtcaactgattggcgggaggccg
ataaggtgctcctggggaaacaagccaactccgccagggacagcatcttcgccacttccc
cctccggcgccatctccattcctcggcggtgtttccgcaactgacttcctggcctaccag
cgtctggccctgagcaagatcgccgctaacccagccctgatgggccaacacgccctgaag
caggccacgctggggatggacaccggagccagccaggctatctacgatggtggcttccag
ggcatcaatgctgccactgccgccgcccagcagcagcagcagcagcaacagctcatgtac
ttctag
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