Setaria italica (foxtail millet): 101771512
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Entry
101771512 CDS
T02818
Name
(RefSeq) transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101771512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sita03021
]
101771512
03036 Chromosome and associated proteins [BR:
sita03036
]
101771512
Transcription machinery [BR:
sita03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
101771512
Coactivators
SAGA/TFTC/STAGA complex
101771512
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
101771512
STAGA complex
101771512
TFTC complex
101771512
SAGA complex
101771512
SLIK complex
101771512
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
101771512
NCBI-ProteinID:
XP_004970563
UniProt:
K3XG57
LinkDB
All DBs
Position
V:complement(41341277..41345717)
Genome browser
AA seq
557 aa
AA seq
DB search
MADPPPVAASASPAQPDQLTAAASVSTPQNPNPNPLLSPQIPPSPTVSDLSAHISSPQQL
DPAAAAASGGGGSMDYPPRPPQLQAPSPTQAGAGAGGFGQIHRSGSTSRLSTASQLPQYA
AMAARMYGAQMSFSGGGGLVGQQQQQQLAGRAPMLGQGQLGMLQGQGNAASAAHFGLQSQ
MMAQARQKGMVQGTQLNNANTAQVLQGMQPMGVMGTMGMSQMRPNGTIPYGAQQRFAHAQ
MRPQASQQAALSPQKVAGQGLSRTASITALNSQLPGSSQNGQMVAMSMPQQQQQQQWLKQ
MQSSMSSPVSPQQQFQHQQRLMLMQQLQQKTGLSQQQLAQVQQQHPHLNAQQLIQQQHFL
QQFQQQQQSLQSPRVSASGSQKSANHTGSQPGTPLSGGTMTGGSASQGAEGTSQLLGKRK
IQDLVAQIDPLGRLDPEVEDLLLEMADDFIDSVTAFACTLAKHRKSSVVEAKDVLLHLEQ
NWHLSVPGFSREDKNPQRNSVKPSVDPQQPESDAAGVRGPGNKLIANNSVGNHQIRPPIA
EPSAMPTMGPLSKAPRF
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccgccgcccgtggccgcctccgcgtcgccggcgcagcccgaccagctcacc
gccgcggcctccgtctccaccccgcagaaccccaaccccaaccccctcctctccccccaa
atccccccgtccccgaccgtctccgacctctccgcgcacatctcgtccccgcagcagctc
gacccggcggccgcggccgcctcggggggcggaggatccatggactacccgccgcggccg
ccccagctgcaggcgccgtcgcccacgcaggcgggggccggcgctggggggttcggccag
atccaccgctcggggtcgacctcccgcctctccaccgccagccagctcccgcagtacgcc
gccatggcggctaggatgtacggcgctcagatgagcttctcgggcggcggaggactggtg
ggccagcagcaacagcagcagctggcggggcgtgcgcccatgcttgggcaggggcagctg
gggatgctgcaaggccagggaaacgcggcatccgcggcacattttgggctccagtcacag
atgatggcgcaggcaaggcaaaagggcatggtacaaggtacacaattgaataatgctaat
acagctcaagtgctgcaagggatgcagcccatgggagtcatgggtactatggggatgagt
cagatgagaccaaatggaactatcccctatggtgcccaacaacggtttgcccatgcacaa
atgagacctcaagcatctcaacaagctgcactatctcctcagaaagtagctggtcaaggc
ttgtcgagaacagcgtcaattacagcattaaattcacaactgcctggatcatcgcaaaat
ggacagatggtggcaatgtccatgcctcagcaacagcaacagcagcagtggttgaagcaa
atgcaatcatccatgagctcaccagtttctccacagcaacaatttcagcaccaacaaaga
ctcatgttaatgcagcaacttcagcagaaaacgggattgagccaacagcaacttgcacaa
gtccaacagcagcatccacatctcaatgcccaacaactgattcagcagcaacattttctc
cagcagtttcagcagcagcagcagtcactacaatctccaagggtttcagcgtctggttcg
cagaagtctgcgaaccatacaggatcacagccaggtacacctttgtccggtggaactatg
actggtggaagtgcaagccagggagctgaaggaactagccaacttcttgggaaaaggaag
atacaagatctggttgcacagatagatcccctaggcaggcttgaccctgaggtggaagat
ctacttttagaaatggctgatgacttcattgactcggtgactgcatttgcgtgcacctta
gcaaaacataggaaatcatcggttgtggaagcaaaggatgtgttgctgcacttagaacaa
aattggcatttgtctgttcctggattctcaagggaggataagaatcctcaaagaaactct
gtaaagccatcagtagatccgcaacaaccagaaagtgatgctgctggtgttagaggccca
ggcaataagcttattgctaataactcggttggcaaccatcaaataagacctccgattgcg
gagccttcagcaatgccaacaatgggacccctgtcgaaggctccccgcttttag
DBGET
integrated database retrieval system
