Setaria italica (foxtail millet): 101771619
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Entry
101771619 CDS
T02818
Name
(RefSeq) E3 ubiquitin-protein ligase Os03g0188200
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sita04121
]
101771619
Enzymes [BR:
sita01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101771619
Ubiquitin system [BR:
sita04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
101771619
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-RING_UBOX
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
zf-RING_16
PHD
Motif
Other DBs
NCBI-GeneID:
101771619
NCBI-ProteinID:
XP_022678736
LinkDB
All DBs
Position
IX:complement(43787701..43789563)
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AA seq
521 aa
AA seq
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MSALSSLASSCINNVKRRPTHTMDLILTPLRIYTLFYGWPQMKALTQGPLPTRPHVTLRL
SPRTSPALLPPGRLSICFSITSPSSRAHRPTSHRTAPHLPSPEASMAPAPPATTWPHRHG
TFLRPLALVLAMLRPVTSQLLQPPPGATLSAAFSPPSPPADAGGGGGGGGRFSLTTSLLF
VSLIAALFLLAFFSAYLRRCSDAATATDAARRRALSANAAVAAAAAAAFASAASVGGGRR
RAAVGLDAAAMEALPVLTYATARAVKAGRGALECAVCLSEFDDAGEKLRLLPGCCHVFHA
ACIDVWLAAHVTCPVCRADLSDPAVADAGHVLAADLAAQAEAPTDTIINIDIEPSESTPE
RGPTSSDEQPAETAEERVDRYTLRLPERLRREIDEARRLRRAMSAVTASTALPSASSGRL
TPAAALRTMSTARQSRRWSGLFRALSGSRRRSEPEGHRRVVPLHTGDGEVEVVVVQDGNV
EKYYAHSLTFAGFVIDGDVAAGDWNPEVFQVSTAGAATSQR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcattgagctctctggcgtcctcctgcattaacaatgtcaaacgcagacccaca
cacaccatggatttgatactcacccctcttcgtatatatactctattctatggttggcct
caaatgaaagctctgacccagggacccctccctactcgtcctcacgtcactctccggctc
tcccctcgcacgtctccagctctcctcccgcctggccgcctctccatttgtttttccatc
acatcgccgtcgtcacgcgcacaccgccccacttcccaccgcaccgcgccccacctcccc
tctcccgaagcttccatggcgcccgcgccgccggctaccacgtggccccaccgccacggc
acattcctccggccactggccctcgtgctcgccatgctccggccggtcacgtcgcagctc
ctccagccgcctcccggcgccaccttatccgccgcgttctcgccgccgtcgccgcccgcc
gacgctggaggcggcggcggcggagggggaaggttcagcctcaccacgtcgctcctcttc
gtcagcctcatcgccgcgctcttcctactcgccttcttctcggcctacctccgccgctgc
tccgacgccgccacggccacggacgccgcgcggcgacgcgccctgagcgccaacgcggcc
gtcgcggcagcggcggcggcagctttcgcgtcggcggccagcgtcggcggcggcaggagg
cgcgccgccgtggggctcgacgccgcggcgatggaggcgctccccgtgctcacgtacgcg
acggcgcgggcggtcaaggccggccgcggggcgctcgagtgcgcggtctgcctctccgag
ttcgacgacgccggcgagaagctccgcctcctccccgggtgctgccacgtgttccacgcc
gcctgcatcgacgtgtggctcgccgcgcacgtcacctgccccgtctgccgcgccgacctc
tccgacccggccgtcgcggacgccggccacgtcctggccgctgacctcgcagcccaggca
gaagcgcccaccgacacgattatcaacatcgacatcgagccgtccgagtcaacgccagaa
cggggccccacatcgtccgacgagcagccagcggagacggcggaggagcgggtggaccgg
tacacgctgcggctgccggagaggctcagacgggagatcgacgaggcgaggcggctccgc
cgggcaatgagcgcggtgaccgcttcgaccgcgttgccgagcgcctcaagcgggcggttg
acgccggcggcggcactacggacaatgtcgaccgcgcgccagagccggcggtggtcgggg
ctgttccgggctctgtcggggtcgcggcggcggagcgagccggagggccaccggagggtg
gtgccattgcataccggcgacggggaggtggaggtggtggtggtgcaggacggtaacgtg
gagaagtactacgcgcacagcctcacgttcgctgggttcgtcatcgacggcgacgtcgcg
gccggcgactggaacccggaggtcttccaggtctcgacggccggcgcggcgacgtcgcag
cggtga
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