Setaria italica (foxtail millet): 101771649
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Entry
101771649 CDS
T02818
Name
(RefSeq) autophagy-related protein 18a
KO
K22991
WD repeat-containing protein 45
Organism
sita
Setaria italica (foxtail millet)
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sita04131
]
101771649
Membrane trafficking [BR:
sita04131
]
Autophagy
Other autophagy associated proteins
Others
101771649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WDR55
Beta-prop_EML
Beta-prop_WDR19_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
CPSF_A
BCAS3_WD40
Beta-prop_HPS5
EIF3I
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_2nd
PEP5_VPS11_N
DUF7099
Beta-prop_IFT80_2nd
Ge1_WD40
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
101771649
NCBI-ProteinID:
XP_004971179
UniProt:
K3XHQ6
LinkDB
All DBs
Position
V:complement(45690703..45694557)
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AA seq
449 aa
AA seq
DB search
MASPAAAAPAPPNPNPVPDDPPLPPSQEEEDEETPDADTSSPPPPPPAPTTSIEPTPSGD
EESESDDSSSVSSAASSVPAASGGAAERPFPAAKDLLHISFNQDYGCFAAGTKSGFRIYN
CDPFREIFRRDLAAEGDGSGGGGIGVVEMLFRCNILALVGGGDNPHYPPNKVMIWDDHQS
RCIGELSFRSPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLCAVSQQP
GSIVLVCPGVQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKGTLVRIY
NAAEGNLLQEVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINVGSTANDKPMP
APDPEVPHISPPLSFIKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVAVVGMDGS
FYRCQFDPVNGGEMLQLECYNFLKPSDQQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcccgccgccgccgcgccggccccaccgaaccctaaccccgtccccgacgac
ccgccgctgccgccgtcgcaggaggaggaggacgaggagacgccggatgcggatacatca
tcgccgccgccgccgccgcccgccccaaccacctcgatcgagcccaccccgtccggcgac
gaggagagcgagagcgacgactcctcgtccgtctcgtcggcagcctcctccgtccccgca
gcctccgggggcgcggccgagaggccgttccccgcggccaaggacctgctccacatctcc
ttcaaccaggactacggctgcttcgcggcgggcaccaagtcgggcttccgcatctacaac
tgcgaccccttccgcgagatcttccgccgcgacctcgccgccgagggggacggcagcggg
ggagggggcatcggcgtcgtcgaaatgctcttccgctgcaacatacttgcgctcgtcggc
ggcggcgataacccccactacccgcccaacaaggtcatgatctgggacgaccaccagagc
cgctgcatcggggagctctccttccgctcccccgtccgcggcgtccgcctgcgccgcgac
cgcatcatagtggtcctcgagaacaagattttcgtgtacaacttcgccgacctcaagctc
gtgcaccagattgagacggcgcccaaccccaagggcctctgcgctgtgtcgcagcagcct
gggtcgatcgtgctggtttgccctggtgtgcagaaggggcaggttagggtggaacactac
ggggcaaggaagaccaagtttatcaatgcacacacttcccgtgttgcgtgctttgcgttg
tcgcaggatgggaggctgattgctactgctagcaccaagggaacgctagtcagaatctac
aatgctgccgagggcaatcttctgcaggaagtaaggagaggtgctgacagagcagaaata
tatagcttggctttctcaaataatttgcagtatttggctgtatccagtgataaaggaaca
attcatgtgttcaatctaaagataaatgtgggatcgaccgcaaatgataagcctatgcct
gctccagatcctgaagttccccatataagtcctccactttccttcattaagggtgtgttg
ccgaaatatttccactctgagtggtcagttgctcaattcagactccatgagggtgagcag
tatattgttgcatttggacacgaaaagaataccgtggcagttgttggtatggatggaagc
ttctacagatgccagtttgaccccgttaatggaggagaaatgctgcagctagagtgctac
aatttcctaaaaccgtcggatcaacagtag
DBGET
integrated database retrieval system