Setaria italica (foxtail millet): 101771815
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Entry
101771815 CDS
T02818
Name
(RefSeq) nucleolar protein 6 isoform X1
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
101771815
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sita03009
]
101771815
Ribosome biogenesis [BR:
sita03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
101771815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D3
Nrap_D4
Nrap_D2
Nrap
Nrap_D6
MDMPI_C
Motif
Other DBs
NCBI-GeneID:
101771815
NCBI-ProteinID:
XP_012702651
UniProt:
A0A368S0U5
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All DBs
Position
VII:complement(33501037..33508817)
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AA seq
1051 aa
AA seq
DB search
MVAAEYSIDRKLSKLVEEARLSAAALRAAAQAADAVAELIKRVPQQQATPEAARGFIRDL
GLEAEKLAFTFRPPEEVRLAGSHAAGAVARPDVAADLLVRLPKECFHEKDFLNHRYHAKR
CLYLCVIEKNLRSSRLIRKVLWSTFQDEARKPVLHVYPATEIADLPGFYVRIIPTANSLF
NVSKLNVSTRNNVRAYTKDGINLPTAKYNCSILEDMFLEENAEFISSTVADWKALQEALV
LVKVWARQRTSIYTHDCLNGYLISAILVFLTVDSGGSIITRSMTTRQIFRVVMNFLATSK
VWAKGLVIQSMKKRTITKEDIANCLKTFDVAICDISGHVNLSFRMTKSAFLELQDEAACA
LNCLDKCRDGGFEELFMTKVDFGAKFDSCLRINLKGNSKVTALSCCVDDESWRILEKDVQ
SLLQQGLTDRTKMIRVLWRSTPSEWKIMDGFSEFGSSPLLVGIMLSSLEKSFRLVDIGPN
PENRSEAIKFRKFWGEKAELRRFKDGNIAESTVWESESWERHTIIKRIADYVLMKHLSLQ
KDDLTHVVDQLDFCLLVDGQDPVSSSGALLEAFDTLSKQLRLLDDVPLKISTVQPLDSAF
RHTSVFPPEPHPLAYGKNSQRLPNFATTCIRSMEVMIQLEGSGNWPLDPVAMEKTKTAFL
LKIGESFSLEDRGMYVSASEDEVNVLTSGYSFLLKIFHERGLVLQKQAGDDNTQSALSQD
KVLFQRSQHSSMINGLHGRYQMYGPVVRLAKRWISAHLFSSIISEEAVELVVAYLFLKPF
PFHAPSSRVAGFLRFLRLLSSFDWTFSPMVIDINNDFNLKDEKEINENFMMSRKSYEQNP
HDIEPAMFLATSYDKASEAWTKQSPSKSVLKRMAVYAKSSAELLTNLILNGQSGQYTWEC
LFQTPMGNYDAVVLLHQEKLCRPHHVLFPAEIPNGKLVIWGKPSKDFHPYMPLNKGVVKS
LHDARDKLLVNFDPTTYFLRDLKCAFPKTFKLWYGSEGGDAVGLTWENPKKRGREEADET
MPELTSILKEVGDVGKGLVRGVYLLKAPKLQ
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atggtcgccgccgaatactccatagaccgcaagctctccaagctcgtggaggaggctcgg
ctgagtgcagcggccctccgcgccgccgcccaggccgctgacgccgtagcggagctcatc
aagagggtgccgcagcagcaggcgacgccggaggcagcgcggggtttcatcagggacctg
gggctagaagcggagaagctcgcgttcaccttccggccgccggaggaggtgcggctcgcc
gggagccacgcggccggcgcggtcgcgaggcccgatgtcgctgcggaccttctcgtacgc
ttgcccaaggaatgcttccacgagaaggatttcctaaatcaccggtaccatgcaaagagg
tgtctttacctctgtgtcattgagaagaacttgaggtcctctcgattaatccgcaaagtt
ttatggtctacctttcaagatgaggctcgaaagcctgtgcttcatgtatatccagcaact
gaaattgcagaccttcctgggttctatgtcagaataatcccaactgcgaattctttgttc
aatgtttcaaagttgaatgtatcaacaagaaacaatgttcgcgcatataccaaagatggc
ataaacctacccacagcaaagtacaattgtagcatattggaggatatgtttttggaggaa
aatgcagaatttataagcagcaccgttgctgactggaaagccttgcaagaggccttggtg
ttagtgaaagtttgggcacgtcaaagaacttcaatatacacacatgattgcctcaacggg
tacttaatatctgccatccttgtgtttcttactgtggactccggaggaagcataattact
agatcaatgactacaagacaaattttccgtgtcgtgatgaattttttggcaacttccaag
gtgtgggcaaagggtttggtgattcagtcaatgaagaagcgtacaatcaccaaagaggac
attgccaattgcctgaaaacatttgatgttgccatatgtgatatatcgggccacgtaaat
ctgtcgtttcggatgacaaagtctgcttttctagagcttcaagatgaggcagcttgtgcg
cttaattgccttgataaatgcagagatggtggatttgaagagctatttatgaccaaagtt
gactttggtgctaagtttgactcatgcttgaggataaacttgaaaggaaactctaaggtt
actgcattaagctgttgcgtggatgatgaatcttggagaattcttgaaaaagatgttcag
tctttgctgcaacaaggacttacagatagaacaaagatgatccgagtcctatggagaagc
acgccttccgaatggaaaataatggatggtttctcagaatttggtagcagtcccctgctc
gttggcataatgcttagctcattggaaaagagttttcgtcttgtggatattggtccaaac
cctgagaaccgcagtgaggctattaaatttaggaaattttggggagagaaagctgaactt
aggagattcaaggatggaaatattgctgaaagcacagtgtgggaatctgaatcttgggag
aggcacacaattatcaaaaggatcgctgattatgtgcttatgaaacatttgtcgctgcag
aaggatgatttgactcatgttgttgatcagctggacttttgcctcttagttgatggccaa
gatccggtctcatcttctggagctttgctcgaagcttttgatactttatctaagcagtta
cgtctgttggatgatgtccctcttaaaatatctaccgtgcaacccctagactcagctttt
aggcacacctctgtgtttcctcctgaacctcatccactggcatatggaaagaattctcag
aggctgccgaatttcgcaacaacttgcattagatctatggaagttatgattcagctagag
ggatctggtaactggccattggatcctgtggccatggagaagacaaagactgcatttctt
ttgaaaattggtgaaagtttcagcttggaggatcgaggaatgtatgtttcagccagtgaa
gatgaggtgaatgtccttacatctggatactcattcttactcaaaatatttcacgaaaga
ggcttagtgttgcaaaagcaagctggagatgataacacacaaagtgctctatcacaagat
aaggtgctttttcagcggagccagcactcaagtatgattaatggtctgcatggccgttac
cagatgtatggaccagtagtcaggctagcaaaaagatggatatctgcacatctgttttct
tcaattatctcagaggaggcagttgagttggtggttgcatatctatttttgaagccattc
ccattccatgccccttcttctcgggttgctgggtttctcaggtttttgcggttgttatcc
agttttgattggaccttttcacccatggttattgacataaataatgacttcaatctgaag
gatgagaaggagatcaatgaaaacttcatgatgagcagaaaatcttatgagcaaaatcct
catgatatagagcctgcaatgtttctcgctacgtcatatgataaagcatctgaagcatgg
acaaaacagtcaccaagcaagtcggttcttaaacggatggctgtttatgctaaaagcagt
gcagaacttttaacaaatcttatactaaatggccaatcagggcaatatacttgggagtgc
ctgttccaaacacctatgggcaattatgatgctgttgttctcctccatcaagagaagctt
tgccgtccccatcatgtacttttccctgccgagattcctaatggtaagttggtgatctgg
ggcaaaccgagtaaagatttccacccctatatgccacttaataaaggggttgtgaaaagt
ttgcatgatgcaagagataaacttttggtaaacttcgacccaactacatacttcctgcga
gacttgaagtgtgcatttcccaaaaccttcaagctgtggtatggttcagaaggaggagat
gctgttggtcttacatgggagaacccaaagaagcgtggcagagaggaggccgatgaaacc
atgccagagctgacatctatccttaaggaggttggagatgttggtaaaggtttggtgagg
ggtgtgtatctcctgaaagcaccaaagcttcagtaa
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