Setaria italica (foxtail millet): 101771992
Help
Entry
101771992 CDS
T02818
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101771992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sita03041
]
101771992
03036 Chromosome and associated proteins [BR:
sita03036
]
101771992
Spliceosome [BR:
sita03041
]
Complex B
Other components
Prp19-related factors
101771992
Complex C
101771992
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
101771992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_14
Suf
HAT
TPR_19
TPR_16
TPR_CcmH_CycH
TPR_17
HAT_Syf1_M
UTP6_C
TPR_2
TPR_9
Mad3_BUB1_I
U3_assoc_6
TPR_12
Motif
Other DBs
NCBI-GeneID:
101771992
NCBI-ProteinID:
XP_004962076
UniProt:
K3Z472
LinkDB
All DBs
Position
III:20401836..20406966
Genome browser
AA seq
721 aa
AA seq
DB search
MALTTRGGGAGGGDPAKAPSASDPSLGFLTKRDTEVKLPRATRVKNKTPAPVQITAEQIL
REARERQEPEIRPPKQKITDTHELAEYRLRKRKEFEDVIRRVRWSVSAWVKYARWEEQQR
DFARARSVYERALDVAHRDHTLWLKYAEFEMRNRFVNHARNVWDRAVSLLPRVDQLWYKY
IHMEELLGAVANARQVFERWMAWRPDTAGWNSYIKFELRYGEVERARAIYERFVAEHPRP
DTFIRYAKFEMKRGEVERARRVYERAADLLADDEDAEVLFVAFAEFEERCREVERARAIY
KHALDRVPKGRAEELYRKFLAFEKQFGDREGIEDAIVGKRRFQYEDEVRKNPLNYDSWFD
YIRLEESVGNKDRIREVYERAIANVPPAEEKRYWQRYIFLWINYALYEELDAQDMERTRE
VYKECLKLIPHKKFTFAKIWLMAAQFEIRQRNLKAARQILGNAIGMAPKGKIFKKYIEIE
LYLGNFDRCRTLYEKYIEWSPANCYAWRKYAELEKNLSETDRARSIYELAIAQPALDTPE
VLWKEYLQFEIDESEFGRARDLYERLLERTKHLKVWISFAEFEASAGLGSEDSESEEKKS
EVGYQEQQMERISKCRAIFERAFDYFRTSAPELKEERAMLLEEWLSKEVSFGDLGDVSLV
QKKAPRKVKRKRPIPTEDGSTIAYEEYIDYIFPDEVAQAPNLKILEAAYKWKKQKTGDDD
E
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcactacacgcggcggcggcgccggcggcggggatcccgcgaaggcgccgtcc
gcctccgaccccagcctcggcttcctcaccaagcgcgacaccgaggtcaagctgccccgc
gccacgcgggtcaagaacaagacccccgcgccggtccagatcacggcggagcagatcctc
cgggaggcccgggagcggcaggagcccgagatacgcccgcccaagcagaagatcacagac
acccacgagctcgccgagtaccgcctccgcaagcggaaggagttcgaggacgtcatccgc
cgcgtgcggtggagcgtctcggcgtgggtcaagtacgcgcggtgggaggagcagcagcgg
gacttcgcgcgcgcgcggtccgtctacgagcgcgcgctcgacgtcgcccaccgcgaccac
acgctctggctcaagtatgccgagttcgagatgcggaaccggttcgtcaaccacgccagg
aacgtctgggaccgtgcggtgtcgctcctcccgcgggtcgaccagctatggtacaagtac
atccacatggaggagctgcttggcgcggttgccaatgcgcgccaggtgtttgagcgctgg
atggcgtggcgacctgacacagctgggtggaattcttacatcaagtttgagctgcgttat
ggggaggtcgagcgcgccagggctatctatgagcggtttgtagctgagcatccacggcca
gacactttcatccgctacgctaagtttgagatgaagcgtggtgaagtagagcgggcacga
cgggtatatgagcgtgcggcggacctgcttgcggacgatgaggatgcagaggtgctgttt
gtggcatttgcagagtttgaggagaggtgccgggaggttgagcgtgcacgtgctatatac
aaacatgcgctggacagggtgccgaagggtcgggctgaggaactgtacaggaagtttctg
gcatttgagaagcaatttggtgaccgtgaggggattgaggatgccattgtggggaagagg
agatttcagtatgaggatgaggtgaggaagaacccactaaactatgactcatggtttgat
tacatccgcctggaggagagtgttgggaataaggacaggatcagggaggtttatgagagg
gccattgctaatgtgccccctgcagaggagaagcggtattggcagaggtatatattcctc
tggattaactatgcactttatgaggagcttgatgcacaagacatggaacggaccagggag
gtttacaaggaatgcctgaagttgattccacacaagaagttcacgttcgcaaagatatgg
ctcatggcagcccagtttgagataagacagagaaatctaaaggctgctcgacaaattctt
ggaaatgcaattggaatggccccgaagggcaagatatttaagaaatatattgaaatcgag
ctgtatcttggaaactttgaccgttgtaggactctttacgagaaatacattgaatggtcc
ccagcaaactgttatgcctggagaaagtatgctgaattggagaagaaccttagtgagact
gatcgtgctcgatcaatatacgaacttgctattgcacagccagcccttgatacgccagag
gttctgtggaaggagtacctgcaatttgaaattgatgaaagtgaatttggtagggcaagg
gatctatatgaaagactgcttgagagaacaaagcatttgaaggtatggatcagttttgct
gagttcgaggcctcagctggcttgggcagtgaagacagcgaaagtgaggagaaaaagagt
gaagttggttatcaggagcagcagatggagcggattagcaaatgtagagctatctttgaa
agggcattcgactacttcagaaccagtgccccagagttgaaggaggaaagagctatgctt
cttgaagaatggcttagtaaggaggtgagcttcggtgatcttggtgatgtcagcttagtg
cagaagaaggctccaagaaaagtcaagcggaagagaccaatccctacggaagatggatcc
accatagcgtatgaggagtatatagattacattttccctgatgaagttgctcaagcacca
aacctgaagatcctagaagctgcttacaaatggaagaagcagaaaactggcgatgatgat
gagtga
DBGET
integrated database retrieval system
