Setaria italica (foxtail millet): 101772044
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Entry
101772044 CDS
T02818
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
sita
Setaria italica (foxtail millet)
Pathway
sita03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sita00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101772044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sita03019
]
101772044
03036 Chromosome and associated proteins [BR:
sita03036
]
101772044
Messenger RNA biogenesis [BR:
sita03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101772044
Chromosome and associated proteins [BR:
sita03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101772044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
101772044
NCBI-ProteinID:
XP_004969266
UniProt:
K3XSI2
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All DBs
Position
V:30203498..30208994
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AA seq
345 aa
AA seq
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MASFSPAAATAANQNPNKSVEVTPAPEDSVSSLSFSPKANHLVATSWDKQVRCWEVLPGG
GCQAKASISHDQPVLCSAWKDDGMTVFSGGCDKQIKMWPLLSGGQPTTLSGHEAPVKELA
WVPQMNLLVSGSWDKTLRYWDIRQPQPVHVQQLPERCYALSLCYPLMVVGTADRNVIVFN
LQNPQAEFKRIVSPLKLQTRCLAAFPDQQGFLVGSIEGRVGVHHVDDSQQSKNFTFKCHR
DGNDIYSVNSLNFHPVHGTFATTGSDGGFNFWDKDSKQRLKAFSKCPAPITCSTFNQDGS
IFAYAVCYDWSKGAEKHNPSTAKTNIFIHSVQESDVKGKPRTGKK
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcttcagccccgccgccgccaccgccgccaaccagaaccctaacaaatccgtc
gaggtgactccggcgcccgaagactcggtctccagtctcagcttcagccccaaggcgaac
catctcgtagctacctcatgggataaacaggttcggtgctgggaggtcctgcctggtggg
ggatgccaagctaaggcctcgatttcgcacgatcagccggtgctgtgctcggcatggaag
gatgatgggatgaccgttttctcgggaggatgtgataagcagattaaaatgtggccgctg
ctgtctggtgggcagcccacaaccttatcaggccatgaggcgcctgtcaaagagctcgcc
tgggtgccacagatgaatcttcttgtcagtggaagctgggacaagactttgaggtactgg
gacattaggcaacctcaaccagtgcatgttcagcaacttcctgagcgatgttatgctcta
tctctttgttatcctctcatggtggttggcactgctgatcgcaatgtaatagtcttcaat
ctgcagaatccacaggctgaattcaagagaattgtatcacctttgaagctccagacgagg
tgtcttgccgcatttcctgatcaacaagggtttttggttggatctatagaaggaagagtt
ggtgttcatcatgtggatgactctcagcaaagcaaaaactttacattcaaatgtcaccgt
gatggcaatgatatatactctgttaactcactgaacttccatcctgtgcacggtacattt
gctactacaggatctgatggaggtttcaatttttgggataaggacagtaagcaaaggctg
aaggcatttagtaagtgtccagcgcccatcacatgcagtacattcaatcaggacggctct
atatttgcttatgcggtatgttatgattggagcaagggcgctgagaagcataatccttct
actgcaaagacaaatatctttatacatagcgtgcaggaatctgatgtcaaaggaaagccc
cgtactggaaagaagtag
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